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rifcsphigho2_02_scaffold_24966_2

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Woesearchaeota_37_9

near complete RP 35 / 55 MC: 3 BSCG 10 / 51 MC: 1 ASCG 32 / 38 MC: 1
Location: comp(195..3884)

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase II large subunit {ECO:0000256|HAMAP-Rule:MF_00324}; Short=Pol II {ECO:0000256|HAMAP-Rule:MF_00324};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00324};; TaxID=1434110 species="Archaea; Eurya similarity UNIPROT
DB: UniProtKB
  • Identity: 40.1
  • Coverage: 999.99
  • Bit_score: 875
  • Evalue 1.00e-250
DNA polymerase, archaeal type II, large subunit (EC:2.7.7.7) similarity KEGG
DB: KEGG
  • Identity: 35.2
  • Coverage: 999.99
  • Bit_score: 717
  • Evalue 7.10e-204
DNA polymerase II large subunit n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MC82_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 40.1
  • Coverage: 999.99
  • Bit_score: 804
  • Evalue 1.20e-229

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Taxonomy

Methanosarcina horonobensis → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 3690
ATGACAGTAACCTCAATTTCAATGCAAAAATATTTTGACAGCATAAATAAGCAGGTTGAATCAGCTTATTCTGTTGCAGGCAAGGCAAGAGCTTTAGGCTATGATCCAGAAGACAAGGTTGACATCCCATTAGCTAAAAACATGGCTGAACGCGTCCATGGGCTGATCTCAGTTGTTGTGCCGCAATTGGATAAGGAAAGTTTGATTGCAGCTATCGTAGAGCTTGAAGCTCAATATGGTGCGTTAGATTGGCGAGTTGGATTTAGGATAGCAGAGGAAGTTACTAAAGAAAAATTCTGCAAGTTCAGCTCAAAAAAAGAATCCATTGAAGCAGGGATAAGGACTGGGTTTGCATATCTTACTTGTGGTATAGTCTCTGCTCCATTAGAGGGGTTTATCGAGCTGAAGATCAAAAAACGCAATGATGGCAAAGAATATTTTGCAGTATATTACGCAGGTCCTATCAGAGGCGCAGGAGGAACAGCTGCAGCAACTTCAGTCATACTTGCAGATTATCTCAGGGTAAAACTAGGGTATGCACCATATGACCCAAGTGATAAAGAAATAATGCGTTATCTTACAGAAGTTTATGATTATCATGAAAGAGCAGTTAATCTCCAATATCTTCCTTCTTTAGAAGAATTAAAATTCCTAGTTATGAATATCCCTGTTGAGATTACAGGTGATCCTACTGAACAGATTGAAGTTTCAAACTACAAGGATCTGCCTAGGATGGAAACAAACAGAATCAGAGGTGGTATGTGCCTAGTCCTTGCAGAAGGCATTTCACAAAAAGCCAACAAACTCTGGAAAAGAGTTGGTGTATGGGGCGAAGAATTCTCACTCGACTGGAAGTTCTTAGAGCAATTTATCGCTCTTCAGAAAAGGATCAAGTCAAAGAGCAAAGTCATAGATACTTCACAAAAAACAAAACTCTCACCTAATTTAACCTATATCACAGATCTTGTAGCTGGAAGACCTATATTAACACATCCTCTAGCTAAAGGCGGGTTTCGCCTTAGATATGGCAAAACAAGGATCAGTGGATTTTCAGCAGCAGGAATCCATCCTATAACTATGCGCATTCTTAACAATTATATTGCAACAGGCACACAATTAAAAATGGAACGCCCAGGAAAGGCCGCGGCAATTACCCCTTGCGATTCAATTGAAGCGCAGATTGTAAGATTAAAAAATGGGTCTGTCATTTATCTAGATTCAGAGCAAAAATACAGGCAATATAAAGATGAGATCGAAAAAATATTATTTTTAGGGGATATATTATTCAGCTATGGCGACTTTTCTGAAAACAACCATTTTTTAGTTCCTGCAGGCTATAATGAAGAATGGTGGCAGCAACACCTTCAAGAAGCTATATTAAAAAAATTCAATGAGATCAATATCCCAAATTTAAGTGTCATGTTAAATATTCCAGAAGATGAGTTAACTATATTGCTGACAAAAACATCACATCCTACTTTAACATTTACCCTTGCATACAAATTATCTGAAACATTCAACATTCCTTTACATCCTAAATATACTTTCCATTGGAAACTAGTCTCCTTAGAAGATCTGTTTCAATTAGTCATTTTGCTTGGCACCCACATCACTACTATCGAAAGAGATGATTTAGGCGAGATTCTTAAGATCATAATAAAGAAACATCCTCATCTAAAAAAAGTTCTTGAGGAAATAGGTGTGCCTCATCTGTTTGTTAATTACGAATTTATCGTCTTAGAGCGACATCATTCTGCTGCTTTTATGTTGCAATTAGGGAATTTAGATAAAACTATTCATCCTATAATAGCTCAAGTCATTGAATCTAACAAATCACAGCAAGCTCAAGGCTCTGGCACAGGCACAGCAATTACTCTAACTTCTCCAACATCTCTAACCTCTTCTACATCTAATAATTTAGCAACTAATCTCCCAAATCCTTTGGCGCATCTCCAGATAAAAAACACTGCTTTAGAAGCCATCCAAAAGATCTCTCTTCTTCCTATAAAAGATAAAAGCGGAACATTTATCGGCGCAAGGATGGGAAGGCCAGAAAAGGCAAAGCAGCGCAAGCTCACTGGTTCCCCGCAAGCATTATTCCCTGTAGGCGAAGAAGGAGGTAGATTACGTAGCTTCTTACAGGCAATCAAAGGCGGCAAGATCAGGTCATTGTTCTCTCTCTATCGTTGCTTAACATGCAGCAAAGAAACCATCTATAAGGTATGTGAAGTCTGTGATTCCAAAACCCAGAAGATGTATTACTGCAAGCTTTGTGGCTTGACTGCTGAAAAAAATTGCCCTAAACATGGCCCATGCTCTACTTACACCATGTGGGAGATAGATGCATCACATTACTTTAATCATGCATTGGACAAGATACAGGATAAAATATTCCCTGAACTTATCAAAGGAGTCAAAGGAACTTCTAATAAGGACCACATCCCAGAAAATCTTATCAAAGGCATTTTAAGAGCAAAACATAATATCTATGTAAACAAAGACGGCACAACAAGATTTGATATGTCTGAGCTTCCATTGACGCACTTTAAGCCTGGGGAAATTACTGTCAGTGTTGAAAAGCTCAAGTCATTGGGCTATACACATGATATCTTTGGTGAAGAGCTAAAAGATGACTCACAGATCCTTGAAATAAAACCGCAAGACATCATCGTCCCTGCAGCAACAGAAGCTTTAGATGACCAAGCAGATATTGTATTGTTGAACGTAGGTAACTTTATCGATGAGCTTTTGGTCAAATTTTACAAGCTAGAGCCTTTCTATAATTTCAAGTCAAGGGAAGACTTAGTTGGCCAGATAGTTATTGCTATCGCGCCCCATATCTCTGCAGGTGTTATTGGAAGGATAATAGGATTCTCTGAAACCCAGGGATTTCTTGCGCATCCATTATTCCATGCAGCTATGAGAAGAGATGCTGATGGTGATGAAGCAGGTGTTATGCTCTTGATGGATGGACTACTTAACTTCTCAAGGTCATTTCTTCCAGATAAGCGAGGCTCAAAGACAATGGACAGCCCTTTAGTTTTAACTGCTACTATAATCCCTAGCGAAGTGGATGAACAGGCTTTAGGTGTTGATGTAGTCACTAAATATCCTCTTGAATTTTATGATGCAGCAACAGAGTACAAGATGCCTTCTGAAATAAAAATCGAGCAGATAAGGCATCGCTTAAACACAGAACAGCAGTATGAGAACATCCGTTATACTCATGATGTGAGCAGCATCAATCTAGGTGTCAAATGCTCTGCTTACAAAAGCCTGCCTAGTATGGAAGAAAAGCTTGCAGGACAAATGGCAATCGCTAAAAAAATCGCAGCAGTAGATGAGCATGATGTTGCCCGTCTGGTGATCGAAAAGCATTTTTTGAAGGATATAAAAGGGAATTTGCGTAAATTCTCAACACAATCCTTTAGGTGCAGCAGCTGTAATGAAAAATATCGAAGACCACCTTTAGTTGGCATCTGCTTAAAATGCTCAGGCAAGATAATCTTTACAGTCTCAGAAGGCTCTGTTGTAAAATATCTGGATTATTCTATTGCATTAAGCAAGGATTACAATGTGCCAGAATATCTCAGGCAGACCATAGAGCTTGTAAAAAGGGCCATTGAAGGCAACTTTGCAAAAGAGAAGGAAAAGCAGTCTGGTCTGCTTAAATGGGCAGTAAGTAGTTGA
PROTEIN sequence
Length: 1230
MTVTSISMQKYFDSINKQVESAYSVAGKARALGYDPEDKVDIPLAKNMAERVHGLISVVVPQLDKESLIAAIVELEAQYGALDWRVGFRIAEEVTKEKFCKFSSKKESIEAGIRTGFAYLTCGIVSAPLEGFIELKIKKRNDGKEYFAVYYAGPIRGAGGTAAATSVILADYLRVKLGYAPYDPSDKEIMRYLTEVYDYHERAVNLQYLPSLEELKFLVMNIPVEITGDPTEQIEVSNYKDLPRMETNRIRGGMCLVLAEGISQKANKLWKRVGVWGEEFSLDWKFLEQFIALQKRIKSKSKVIDTSQKTKLSPNLTYITDLVAGRPILTHPLAKGGFRLRYGKTRISGFSAAGIHPITMRILNNYIATGTQLKMERPGKAAAITPCDSIEAQIVRLKNGSVIYLDSEQKYRQYKDEIEKILFLGDILFSYGDFSENNHFLVPAGYNEEWWQQHLQEAILKKFNEINIPNLSVMLNIPEDELTILLTKTSHPTLTFTLAYKLSETFNIPLHPKYTFHWKLVSLEDLFQLVILLGTHITTIERDDLGEILKIIIKKHPHLKKVLEEIGVPHLFVNYEFIVLERHHSAAFMLQLGNLDKTIHPIIAQVIESNKSQQAQGSGTGTAITLTSPTSLTSSTSNNLATNLPNPLAHLQIKNTALEAIQKISLLPIKDKSGTFIGARMGRPEKAKQRKLTGSPQALFPVGEEGGRLRSFLQAIKGGKIRSLFSLYRCLTCSKETIYKVCEVCDSKTQKMYYCKLCGLTAEKNCPKHGPCSTYTMWEIDASHYFNHALDKIQDKIFPELIKGVKGTSNKDHIPENLIKGILRAKHNIYVNKDGTTRFDMSELPLTHFKPGEITVSVEKLKSLGYTHDIFGEELKDDSQILEIKPQDIIVPAATEALDDQADIVLLNVGNFIDELLVKFYKLEPFYNFKSREDLVGQIVIAIAPHISAGVIGRIIGFSETQGFLAHPLFHAAMRRDADGDEAGVMLLMDGLLNFSRSFLPDKRGSKTMDSPLVLTATIIPSEVDEQALGVDVVTKYPLEFYDAATEYKMPSEIKIEQIRHRLNTEQQYENIRYTHDVSSINLGVKCSAYKSLPSMEEKLAGQMAIAKKIAAVDEHDVARLVIEKHFLKDIKGNLRKFSTQSFRCSSCNEKYRRPPLVGICLKCSGKIIFTVSEGSVVKYLDYSIALSKDYNVPEYLRQTIELVKRAIEGNFAKEKEKQSGLLKWAVSS*