ggKbase home page

rifcsphigho2_02_scaffold_68569_6

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Woesearchaeota_37_9

near complete RP 35 / 55 MC: 3 BSCG 10 / 51 MC: 1 ASCG 32 / 38 MC: 1
Location: comp(3132..3485)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein KEGG
DB: KEGG
  • Identity: 43.6
  • Coverage: 110.0
  • Bit_score: 96
  • Evalue 5.60e-18
RNA polymerase II, Rpb4 Tax=CG_Woesearch_02 similarity UNIPROT
DB: UniProtKB
  • Identity: 55.6
  • Coverage: 117.0
  • Bit_score: 137
  • Evalue 1.10e-29
RNA polymerase II, Rpb4 id=5799707 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized similarity UNIREF
DB: UNIREF100
  • Identity: 53.2
  • Coverage: 111.0
  • Bit_score: 118
  • Evalue 6.40e-24

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Woesearch_02 → Woesearchaeota → Archaea

Sequences

DNA sequence
Length: 354
ATGGCAAAACCACATCTGATAAGCGAACATCCGATTTCCATGGCAGAACTGAAGTTAGAGCTGGAAAACGTAAAAAAGCGCGACACTGAGTTAAATTTCAGAGCAAATAAGACAGAAGAATATATATCTCAGGTTCTTGAGTTTGATTATACTAAAGCAGAGGAGATAAAGAAAAAGATAAGTAAGCTTGAGGTTCCTAGATTAAAGGAAGAGCATATCTGCAAAATCTTAGATCTGAATCCAAAGACAGCTGAAGAGCTAAAAGTAATTCTACAGGGATACACGCTAAGTGTAACCAAGGAAAATCTGAAAAAGATAGTGGATGTGCTGGCAGAGTATAGTACAGCTAAATAA
PROTEIN sequence
Length: 118
MAKPHLISEHPISMAELKLELENVKKRDTELNFRANKTEEYISQVLEFDYTKAEEIKKKISKLEVPRLKEEHICKILDLNPKTAEELKVILQGYTLSVTKENLKKIVDVLAEYSTAK*