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rifcsphigho2_02_scaffold_6599_30

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Woesearchaeota_39_9

near complete RP 34 / 55 MC: 5 BSCG 14 / 51 ASCG 32 / 38 MC: 1
Location: comp(28847..29497)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4 n=1 Tax=Pyrococcus sp. ST04 RepID=I3RFU1_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 51.4
  • Coverage: 177.0
  • Bit_score: 189
  • Evalue 4.20e-45
30S ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 51.4
  • Coverage: 177.0
  • Bit_score: 189
  • Evalue 1.20e-45
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306, ECO:0000256|SAAS:SAAS00016650}; TaxID=1183377 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 51.4
  • Coverage: 177.0
  • Bit_score: 189
  • Evalue 5.90e-45

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Taxonomy

Pyrococcus sp. ST04 → Pyrococcus → Thermococcales → Thermococci → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 651
ATGGGAGATCCACGACACATTGGAAAAAAGTACGTACCACCAAATCATCCTTGGATACGTGCGCGTATAGAAGAATCCAAAGTTCTTGCTAAAGAATACGGCTTCAAAAATCGTAAAGAAATTTGGAAGATGGAATCCATTCTCAAAAGCTTCACACGCCAGGCAAAAAAACTCGCTATCGTTAGAGGAAAGCCAGAGCAGGTGGAAAAAGAAAGAAAACAAGTCATTGCGAGAGTACAAAAATATGGTTTAATTTCTCAAAATGCTCAACTGGGAGATATTCTTGGTTTAACCACGAAGGATATTATGAACAGACGTTTACAATCCATCATTGTGAAGAAGGGTCTTGCACGCACGGTAAAACAATCACGTCAAATGATCACTCATGGTCACATCATCATTAAGGGAATTCCCATGACATCTCCTTCCTATCTTGTTCCTATTATAGAAGAATCCATGATAGCTTTTAAGACAACTTCTGGCTTCGCAAATCCAGAGCACCCTGAAAGAACTGTTGTTCCCAAAAAAAAGCCTGTTGAAAAGAGAGAAGAGAGAAGGTTTGATGGGTCACGAAGAAGGGAACAGAGAAGGGAAAGGCCGAGAGGACGTCCTGTTCAACAAAATATTATCATAGAAGAGGTTGACGAATGA
PROTEIN sequence
Length: 217
MGDPRHIGKKYVPPNHPWIRARIEESKVLAKEYGFKNRKEIWKMESILKSFTRQAKKLAIVRGKPEQVEKERKQVIARVQKYGLISQNAQLGDILGLTTKDIMNRRLQSIIVKKGLARTVKQSRQMITHGHIIIKGIPMTSPSYLVPIIEESMIAFKTTSGFANPEHPERTVVPKKKPVEKREERRFDGSRRREQRRERPRGRPVQQNIIIEEVDE*