ggKbase home page

rifcsphigho2_02_scaffold_31042_2

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Woesearchaeota_39_9

near complete RP 34 / 55 MC: 5 BSCG 14 / 51 ASCG 32 / 38 MC: 1
Location: comp(598..1143)

Top 3 Functional Annotations

Value Algorithm Source
TrmH family RNA methyltransferase, group 1 Tax=CG_Woesearch_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 47.8
  • Coverage: 182.0
  • Bit_score: 175
  • Evalue 7.30e-41
RNA methyltransferase, TrmH family, group 1 id=5800379 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized similarity UNIREF
DB: UNIREF100
  • Identity: 38.7
  • Coverage: 163.0
  • Bit_score: 146
  • Evalue 2.00e-32
RNA methyltransferase TrmH family similarity KEGG
DB: KEGG
  • Identity: 40.1
  • Coverage: 167.0
  • Bit_score: 128
  • Evalue 2.10e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Woesearch_01 → Woesearchaeota → Archaea

Sequences

DNA sequence
Length: 546
ATGATGGCACTAAAAAAAGCAAAAATAGTAAAGAAAATTCCAAAGATGCACACCTTGATTGGCACGACCGCTCGTCTTGGCACGGACTTTAATGTTCCAAGGTCTCCGATGAGTCCTGATCAGCTTATCGATCTTCTTCCGAAATCAAAGCAAAACATGGGTTTGGTTTTTGGTAGGGAAACAACGGGCTTAACAAATGAGGAAGTTCAGCAATGTGATTTTGTGGTAACTATCCCAACAAAGAGGGAGTACCAATCTCTTAACTTGAGTCATGCCGTTGCTATACTCCTTTATGAGTTATACAAGCATTCAGGTGATGTTAAGCCCCATGAAAAAGTCACGATGGCTTCTGAAAGAGAAAAAAAGCAAGTGATTATCATGTTCAAGGACGTTATCGGCAAGCTTCACTTTCCCACCCCTACAAAAAAGCAGACGCAGCTTAAAGTCTGGAAACGCATCATGGGAAAAAGCTTTCTCACTAAAAGAGAAGCTTACGCTTTGATGGGTTTTTTCAAACAGGCGAAGCATGCGTTGAAAAAGAAATAG
PROTEIN sequence
Length: 182
MMALKKAKIVKKIPKMHTLIGTTARLGTDFNVPRSPMSPDQLIDLLPKSKQNMGLVFGRETTGLTNEEVQQCDFVVTIPTKREYQSLNLSHAVAILLYELYKHSGDVKPHEKVTMASEREKKQVIIMFKDVIGKLHFPTPTKKQTQLKVWKRIMGKSFLTKREAYALMGFFKQAKHALKKK*