ggKbase home page

rifcsphigho2_02_scaffold_48159_3

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Pacearchaeota_38_12

partial RP 29 / 55 MC: 5 BSCG 21 / 51 MC: 1 ASCG 29 / 38 MC: 1
Location: comp(909..1415)

Top 3 Functional Annotations

Value Algorithm Source
transcription antitermination protein NusG; K02601 transcriptional antiterminator NusG Tax=CG_Pacearch_06 similarity UNIPROT
DB: UniProtKB
  • Identity: 65.5
  • Coverage: 168.0
  • Bit_score: 222
  • Evalue 3.70e-55
NusG antitermination factor; K02601 transcriptional antiterminator NusG id=5043662 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b similarity UNIREF
DB: UNIREF100
  • Identity: 46.9
  • Coverage: 162.0
  • Bit_score: 163
  • Evalue 1.90e-37
LSU ribosomal protein L24A Rpl24A similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 152.0
  • Bit_score: 157
  • Evalue 3.90e-36

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Pacearch_06 → Pacearchaeota → Archaea

Sequences

DNA sequence
Length: 507
ATGATATTTATTATCAAAGTAACGACGAACAAAGAAGAGCGCGCACTTGAGATGATGGAAGAGCGCGTGAAGAAAAAAAATCTGAGTGTATTTGCAATTGTGCGCCCGCATGGACTTAAGGGATATGTTATAATGGAAGCGATTGACAGAGAGAGCGCTGAAGAAGCCGCGTTCAATTTGCCGTATGTAAAAGGAATAATCGGCAAGACTGTAAAGTATGAAGACGTCCAGCAAATGCTTGAGCCGAAAGTTGAAGACGTTAACATTGAGATTGGCGACATTGTTGAAATGATTGGCTCGACATTCAAAGGCGAACAGGCGAAGGTTACAAGAATTGACAAGGCAAAGGGCGAGGTTGTTGTTTCTTTATTGGGAGCTTCTGTTCCGATTCCGGTTACAGTCAAGATAGACAATATCAAAGTCATTAGAAGAGAAGAGAGGGAAGAGGAAAAGCATAAAAAGAATGAAACTGATGAGAGCAGAGACTTTGCGGAGGATTTTGAATGA
PROTEIN sequence
Length: 169
MIFIIKVTTNKEERALEMMEERVKKKNLSVFAIVRPHGLKGYVIMEAIDRESAEEAAFNLPYVKGIIGKTVKYEDVQQMLEPKVEDVNIEIGDIVEMIGSTFKGEQAKVTRIDKAKGEVVVSLLGASVPIPVTVKIDNIKVIRREEREEEKHKKNETDESRDFAEDFE*