ggKbase home page

rifcsphigho2_02_scaffold_1067_36

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Micrarchaeota_50_12

near complete RP 35 / 55 MC: 5 BSCG 13 / 51 ASCG 37 / 38
Location: 29127..29594

Top 3 Functional Annotations

Value Algorithm Source
Looped-hinge helix DNA binding domain, AbrB family n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7U5H7_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 35.9
  • Coverage: 131.0
  • Bit_score: 88
  • Evalue 7.20e-15
hypothetical protein Tax=CG_Micra_05 similarity UNIPROT
DB: UniProtKB
  • Identity: 47.0
  • Coverage: 134.0
  • Bit_score: 138
  • Evalue 1.10e-29
AbrB family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 28.4
  • Coverage: 134.0
  • Bit_score: 72
  • Evalue 1.50e-10

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Micra_05 → Micraarchaeota → Archaea

Sequences

DNA sequence
Length: 468
GTGGCAAAGAACCCTTTTTGCGCTTTCAGGCCGGCACGGTGCAATGCGCGTAAAGTGAAACACATGGCAAAGAACTCAATTGGCAGGATAGACGAGCGCGGAAGGCTGATAGTGCCAGCCTCTTTTCGCGAAATGCTTAACCTTAAGCCCAACTCAAACGTTCTCCTTCTCCTTGATGACGAGAACAAGACAGTCTCAATAGTGCCCTTTGCCGCAATGGGCGAGGAACTGCACCATTTGCGCCTTGAAATGGCGGACGCGCCGGGAACCCTCTCAAAAATACTCCTTCTTCTTGCAAAAGAGGGCGCGGATCTGATATGGAGCGAATCCGCAAGCAGAATGCGCGGTCAATCCGCAACCTACGAGGCGCTCCTTGATTTCACTTGCTGCAAAAAAAAGCCCGCAATGCTTGAAAAGCTCCTTCTCTCGCAAAAGCTGGCAAAAAGCGTGCAGATAAAAAAACTGTAA
PROTEIN sequence
Length: 156
VAKNPFCAFRPARCNARKVKHMAKNSIGRIDERGRLIVPASFREMLNLKPNSNVLLLLDDENKTVSIVPFAAMGEELHHLRLEMADAPGTLSKILLLLAKEGADLIWSESASRMRGQSATYEALLDFTCCKKKPAMLEKLLLSQKLAKSVQIKKL*