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rifcsphigho2_02_scaffold_623_5

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Woesearchaeota_32_10

partial RP 35 / 55 MC: 4 BSCG 13 / 51 ASCG 30 / 38 MC: 2
Location: 3259..4122

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family id=4224133 bin=GWF2_Bacteroidetes_33_38 species=unknown genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699 similarity UNIREF
DB: UNIREF100
  • Identity: 48.9
  • Coverage: 278.0
  • Bit_score: 253
  • Evalue 2.40e-64
RNA polymerase sigma-70 factor; K03086 RNA polymerase primary sigma factor Tax=GWF2_Bacteroidetes_33_38_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 48.9
  • Coverage: 278.0
  • Bit_score: 253
  • Evalue 3.40e-64
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 48.2
  • Coverage: 280.0
  • Bit_score: 241
  • Evalue 2.70e-61

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Taxonomy

GWF2_Bacteroidetes_33_38_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 864
ATGGTACACAAATACAGCAACAAGCCTGAAATTTATAACAGAGAATCCATTGATGTTTATCTTAGAGAGATATCCAAAATACCTTTGATAATGCGTGAAGAAGAATCAGAACTTGCAAGAAAGAAAAGAGGAGGAGACCAAGATTCGCTGGACAAACTTGTCAAATCAAACTTAAAGTTTGTTGTGTACATTGCCAAGAACTATCAAAATTATGGCCTTCCACTGGATGATTTGATAAATGAAGGGAACCTTAGACTGATAAAGGCTGCAAAAAGATTTGATGAAACAAGAGGATTTAAATTTATCAGCTATGCTGTCTGGTGGATCAGACAAGGCATATTACAGGCATTAATATCTGCACCATATCAGAAATTACCCAGAGATTTTTTAAAGCAAAAAAGAGCTGTTGATTGTACTATTAGTTTATTGGAGCAAAACCTTGGTAGAGAACCGACATTACTCGAGATAAGTGAAGAATCCAATATTAATCAGAATGAATTGGATTCATTTTTTATCTCAAAATTTAAAATGATGCATCTGGAAGATACTATTGGCAATGATAACAAAAGCAATCAGTATCATAACTTTATTGAAGATACTATTATAGCAAAACCTGACGAAGATTTATATCGAAATAATATGAAGAATGATATTGTAAATGCCCTAAGAACCCTTCCTGAAAGAGAATGTGAAGTTTTGATATTGTATTTCGGGATCAACGAGCATAGACCCTATACATTAGAAGAAATAGGCACTCGTTTTGGGCTGACAAGGGAAAGAATAAGACAGATAAAACTGAGTGGATTAAACCGTTTGCGAAATACTCATAAAGGTTTACCTTTGCGTAAATATAAGGAAGATTAA
PROTEIN sequence
Length: 288
MVHKYSNKPEIYNRESIDVYLREISKIPLIMREEESELARKKRGGDQDSLDKLVKSNLKFVVYIAKNYQNYGLPLDDLINEGNLRLIKAAKRFDETRGFKFISYAVWWIRQGILQALISAPYQKLPRDFLKQKRAVDCTISLLEQNLGREPTLLEISEESNINQNELDSFFISKFKMMHLEDTIGNDNKSNQYHNFIEDTIIAKPDEDLYRNNMKNDIVNALRTLPERECEVLILYFGINEHRPYTLEEIGTRFGLTRERIRQIKLSGLNRLRNTHKGLPLRKYKED*