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rifcsphigho2_02_scaffold_8818_18

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Woesearchaeota_32_10

partial RP 35 / 55 MC: 4 BSCG 13 / 51 ASCG 30 / 38 MC: 2
Location: 20504..21262

Top 3 Functional Annotations

Value Algorithm Source
Transcription factor E n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HND9_PYRSN id=5102919 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 40.2
  • Coverage: 249.0
  • Bit_score: 182
  • Evalue 4.60e-43
Transcription factor E similarity KEGG
DB: KEGG
  • Identity: 40.2
  • Coverage: 249.0
  • Bit_score: 182
  • Evalue 1.30e-43
Transcription factor E {ECO:0000256|HAMAP-Rule:MF_01909, ECO:0000256|SAAS:SAAS00008967}; Short=TFE {ECO:0000256|HAMAP-Rule:MF_01909};; TFIIE subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01909}; Tr similarity UNIPROT
DB: UniProtKB
  • Identity: 40.2
  • Coverage: 249.0
  • Bit_score: 182
  • Evalue 6.40e-43

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Taxonomy

archaeon GW2011_AR20 → Archaea

Sequences

DNA sequence
Length: 759
ATGAAGATTTTTAATGATATCTCTAAGCAGCTGATAAAAGAAATTATTAGTGACAAAGGTGTTGCTCTTTATAATCTTATCTGGAACAAAAAAAATGTTTCTGAATTCAAAATTGCTGAGGAGCTTAAATTAACAATAAACCAGATAAGGAACATATTATATCAGTTTTCTACTTATAACCTGGTGTGTTCTACAAGAAGAAAAGACAGGGAAAAAGGATGGTATATCTATTACTGGACAATAAACCTGAATGAGTTAAGGCTCTTGCTGGTTCAGAGAAAAAAAGCAAATCTGGAGCGCTTGCGTGAAGAATTGGACACAGAGAAAGACAATAAGTTCTATATATGCAGCAGAGATGGGACAAAGCTTGAATTAGAAGAGGCAATGGAGCAGAATTTTAAATGCCAAGAATGCGAGTCAGTTTTGGTTCATTCGAACAATCAGAAAAGGATAGAAAGCATAAACGCTGAAATTGAAGAGACAAGAACAGATTTGGACAATCTGATGAATGACACTTTTGTCCAGGATGCTATTGCACAGCAGGTTGAAGAAAAAATCCCTGAAGAAGAGGTCACAAGGCACAAGAGAAGAAAATTGAAAAAGGTCTCTAAAAAACATAAGAAGAAAAAGAAGCATAAAAAGAAAAAACCAAAAGAGAGGAGCGAGAAATTAAAACACAAAAAACAATCAAAAAACAAAAAGTCTTATTCAGTTTCTCATAAAAAAACAAAAAGCAAATATAAACGGCATAAATTTTAA
PROTEIN sequence
Length: 253
MKIFNDISKQLIKEIISDKGVALYNLIWNKKNVSEFKIAEELKLTINQIRNILYQFSTYNLVCSTRRKDREKGWYIYYWTINLNELRLLLVQRKKANLERLREELDTEKDNKFYICSRDGTKLELEEAMEQNFKCQECESVLVHSNNQKRIESINAEIEETRTDLDNLMNDTFVQDAIAQQVEEKIPEEEVTRHKRRKLKKVSKKHKKKKKHKKKKPKERSEKLKHKKQSKNKKSYSVSHKKTKSKYKRHKF*