ggKbase home page

rifcsphigho2_02_scaffold_26139_2

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Woesearchaeota_40_19b

near complete RP 31 / 55 MC: 6 BSCG 10 / 51 MC: 1 ASCG 32 / 38 MC: 3
Location: comp(339..1385)

Top 3 Functional Annotations

Value Algorithm Source
Protein pelota {ECO:0000313|EMBL:KHO49054.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.1
  • Coverage: 348.0
  • Bit_score: 430
  • Evalue 1.90e-117
Protein pelota homolog id=5800182 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized similarity UNIREF
DB: UNIREF100
  • Identity: 43.9
  • Coverage: 351.0
  • Bit_score: 300
  • Evalue 2.10e-78
mRNA surveillance protein Pelota similarity KEGG
DB: KEGG
  • Identity: 35.8
  • Coverage: 360.0
  • Bit_score: 220
  • Evalue 7.70e-55

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

archaeon GW2011_AR9 → Archaea

Sequences

DNA sequence
Length: 1047
ATGCAACTCATAACTTCCGATTTTAAGAAAGGATTTGTAAAACTCAAGATCAACGACCAAGATGATCTCTGGTATCTCAGTCATTTGATCGATCAAGGAGATCTGGTTAGAGGCAAGACTACCCGGAAAATTAAAATCGGAGAAGGGGAAAATGCCAAATCGGTCAAGAAAACTCTTACTTTATCCATAGAAGCAGAAACAATAGAGCTAACGGAAAATTCTGTGCGTATCAACGGCAAGGTCAAGGAAGAAACAGAAGACGTTCCTAAAGGCAGCTATCATTCCATCACCTTAGAAGAATCATCTGAATTTACTTTAGAAAAACCGCAATGGCTGGAATATCAAAAACAGAAACTGCAGGAAGCTTGTGAAAAGAAATATGATTATTTACTCTGTCTTTTTGACCGAGAAGAGGTACTATTTGCGCTAACCAAAAAATTTGGCTATGAAATTTTGACCACGCTGAAAGGCGAAGTGCAAAAGAAAGCCAAAGCCGTGGAAGTACGAAAAGATTTTCAGGAAGAAATTATCAAAACACTAGAAGCATACCACGAGAGATACAAACCCAGCGCCATTATTGTAGCTTCTCCTGCCTTTTACAAAGAAGATCTCTACAAAAAAATACCTCAATCTGAATTGAAAAAGAAAATTGTCTTAGCGATCTGCTCCGACATTAGTGAACGATCCTTGGATGAAGTGATGCGCCGCCCAGAATTAGCTGAAACTTTGAAACACAGCCGTGCCCGCAAAGAACAATTATTAGTAGAAGAACTGCTCAAAGAGATCAACAAAAATAACAAAGCTGCTTATGGCTGGAAAGAAGTGCAGGAAGCTGCCAACAGCGGAGCAGTATTAAAACTGTTATTGACCGATGATTTCATCCACCAAAAAAGAATGGCGGGCGAATTTACAGCAGTTGACCAATGCATGAAAACAGTTGATTCTTTGGAAGGAGAGATCCATATTATTTCTGCCGAGAGCGATGCGGGAAAAAAAATGAATGGCCTGGGCGGAATTGCCGCTATTCTGAGATATAAAAAATATTAG
PROTEIN sequence
Length: 349
MQLITSDFKKGFVKLKINDQDDLWYLSHLIDQGDLVRGKTTRKIKIGEGENAKSVKKTLTLSIEAETIELTENSVRINGKVKEETEDVPKGSYHSITLEESSEFTLEKPQWLEYQKQKLQEACEKKYDYLLCLFDREEVLFALTKKFGYEILTTLKGEVQKKAKAVEVRKDFQEEIIKTLEAYHERYKPSAIIVASPAFYKEDLYKKIPQSELKKKIVLAICSDISERSLDEVMRRPELAETLKHSRARKEQLLVEELLKEINKNNKAAYGWKEVQEAANSGAVLKLLLTDDFIHQKRMAGEFTAVDQCMKTVDSLEGEIHIISAESDAGKKMNGLGGIAAILRYKKY*