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RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_31565_6

Organism: Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_02_FULL_45_21

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(4726..5448)

Top 3 Functional Annotations

Value Algorithm Source
lptB; lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 240.0
  • Bit_score: 466
  • Evalue 2.80e-128
Putative lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily id=2180015 bin=GWB2_CP_45_9 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3 similarity UNIREF
DB: UNIREF100
  • Identity: 90.5
  • Coverage: 241.0
  • Bit_score: 423
  • Evalue 1.90e-115
lptB; lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily similarity KEGG
DB: KEGG
  • Identity: 62.4
  • Coverage: 237.0
  • Bit_score: 311
  • Evalue 3.00e-82

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Taxonomy

R_WOR_2_45_21 → WOR-2 → Bacteria

Sequences

DNA sequence
Length: 723
ATGCATCTCTTAGAAACTAAAGGCTTAGAGAAATCTTACAACGGCAGAAAGGTTGTCTGCGGCGTTGATATCTTAGTTAAAAGAGGTGAAGTGGTCGGGCTCCTGGGCCCAAACGGGGCAGGCAAAACCACTACCTTCTATATGATCGTGGGCATAGTTTCTCCTGATAAAGGAAATATTGTCTTTGATAACGAGGATATAACGAAACTACCCATACACCAGCGCAGCCGCTTAGGTATCGGGTACCTGGCCCAGGAAACCTCGGTATTTAGAAAACTGAACGTAGAAGATAATATCATGGCTATCCTGGAAACCTTGCCTTTAGCTGCGCATCAGCGCGCAAAAAGGCTCAAGGGGCTTTTAGCTGAGTTAAATATCGCTCATCTTGCCAGGTCAAAGGCCTATACCTTATCCGGCGGCGAAACGCGGCGCTTAGAGATTACGCGGGCGCTGGTGACCCGGCCGTCTTTTATACTTTTAGATGAACCGTTTTCAGGCATAGACCCTATCGTTGTCTCTGAGGCGCAAGGCATCATCCGGGAATTAAAGGCCAAGGGCCTGGGCGTATTGGTTACCGACCATAATGTGCGGGAGACACTTTCCATTACTGACCGGGCGTATTTGATTTCCGACGGTAAGATTTTAATCTCAGGGACAGCCCAGGATTTGATTGATAACCCCCAGGCGCGCTCAATTTATCTGGGTGAGAAATTCAGGATGTAA
PROTEIN sequence
Length: 241
MHLLETKGLEKSYNGRKVVCGVDILVKRGEVVGLLGPNGAGKTTTFYMIVGIVSPDKGNIVFDNEDITKLPIHQRSRLGIGYLAQETSVFRKLNVEDNIMAILETLPLAAHQRAKRLKGLLAELNIAHLARSKAYTLSGGETRRLEITRALVTRPSFILLDEPFSGIDPIVVSEAQGIIRELKAKGLGVLVTDHNVRETLSITDRAYLISDGKILISGTAQDLIDNPQARSIYLGEKFRM*