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RIFCSPHIGHO2_02_FULL_CPR_45_21_rifcsphigho2_02_scaffold_1933_20

Organism: Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_02_FULL_45_21

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: 20043..20960

Top 3 Functional Annotations

Value Algorithm Source
shikimate 5-dehydrogenase Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 305.0
  • Bit_score: 595
  • Evalue 5.00e-167
Shikimate dehydrogenase id=2241542 bin=GWB2_CP_45_9 species=Halobacteroides halobius genus=Halobacteroides taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3 similarity UNIREF
DB: UNIREF100
  • Identity: 60.8
  • Coverage: 311.0
  • Bit_score: 353
  • Evalue 2.40e-94
shikimate 5-dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 39.4
  • Coverage: 302.0
  • Bit_score: 199
  • Evalue 1.20e-48

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Taxonomy

R_WOR_2_45_21 → WOR-2 → Bacteria

Sequences

DNA sequence
Length: 918
ATGAAAGAATCCGCAGCCGAAATCTATGCTTTGATTGGTTACCCGGTTAAACATAGCTTATCAGCGTTAATGCACAACGCGGCATTCAAAGCCCTGAATATAAATGCAGAGTATAGATTATTTGAGGTAACGCCAGAAAAGCTTGAAGATTTCTTATTTGGAAATCTTCAAGTGAGCGATGTCCAGGGAGAGGTTTCTATTAATTCCCGGGAGATAGCAGGTTTCAATATAACTATTCCCCACAAGGTTAGAGCTTTAGAACTAGCAAGCCTTGTTAAAGAGATTACTGTTGTCCAAAACGCATCTGTTCTTTTATCCGGAGCTATAAATACAGTAAAAAGAGGTAATGGTAAATTATTTTATCATAATACTGATATTGAGGGGTTTATGAAGTCTTTGCGAGAGGATTTAAAATTTGATACCAGAAATAAAAATGCGTTTCTTTTTGGTTGTGGTGGAGCGGGCAGAGCTGTAATTGCGGCTTTGACATTAGAAGGAACCGGGATTAAAAAGATATATGTATACGAGAAAAACAAAGAGACGATTAACGTTGCAGAAAAACATTTTAACCTTAAGGAAAAATTGGAATTTATCTCTGCAGAACAAATATCCGATAAACTAAAAGATTCCGATTTGCTTGTTAATGCTTCTCCGGTTGGTTTGAAAGAAGGCGACGGTTCTATAATAGAGAATAATTTACTTCACCTGGGATTGTTCGTATATGATTTAGTATACAACCGTAAAACTCAACTTATTAAAGACGCTGAACAGTTAGGGCTTTCTGCGATAGGTGGTTTGGGTATGCTCCTTTATCAGGGGGCGGCTGCATTTGAAATATGGAGTACTCCGCGAAAAGCGCCTATTGAGTTGATGCGTCAGGCGCTTGAGAAAGGATTAGGGCAATGCCGGATGAGATAA
PROTEIN sequence
Length: 306
MKESAAEIYALIGYPVKHSLSALMHNAAFKALNINAEYRLFEVTPEKLEDFLFGNLQVSDVQGEVSINSREIAGFNITIPHKVRALELASLVKEITVVQNASVLLSGAINTVKRGNGKLFYHNTDIEGFMKSLREDLKFDTRNKNAFLFGCGGAGRAVIAALTLEGTGIKKIYVYEKNKETINVAEKHFNLKEKLEFISAEQISDKLKDSDLLVNASPVGLKEGDGSIIENNLLHLGLFVYDLVYNRKTQLIKDAEQLGLSAIGGLGMLLYQGAAAFEIWSTPRKAPIELMRQALEKGLGQCRMR*