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RIFCSPHIGHO2_02_FULL_CP_51_18_RIFCSPHIGHO2_02_FULL_CP_51_18_rifcsphigho2_02_scaffold_8734_17

Organism: Omnitrophica bacterium RIFCSPHIGHO2_02_FULL_51_18

near complete RP 46 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: comp(18265..20256)

Top 3 Functional Annotations

Value Algorithm Source
ligand-gated TonB-dependent outer membrane channel KEGG
DB: KEGG
  • Identity: 43.9
  • Coverage: 654.0
  • Bit_score: 523
  • Evalue 1.10e-145
Tax=RIFCSPHIGHO2_02_FULL_OP3X_51_18_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 663.0
  • Bit_score: 1341
  • Evalue 0.0

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Taxonomy

R_OP3X_51_18 → OP3X → Bacteria

Sequences

DNA sequence
Length: 1992
ATGCCAAAAAAAGTCGTGTTCGTACTTGCCCTGTGCCTTCTTGTGCTTTCTGGTAGAGCGTTTGCGGTGGCAGCCGCGCCCGGCTTGACAGAACTCAGCCTCGAGGAGCTTATGAATGTCGAGATCACCTCTGTTTCCAAGACGCCGCAGGTTTTGTCGAGAACGGCCGCCGCCGTTCACGTCATAAGCAATGAGGAAATACGCCGCTCGGGCGCCGCGACCATTCCGGACCTCTTGCGGCTCGTGCCCGGCGTGCAGGTCGTCCGCATCGACGCCAACAAATGGGCGGTGAGCGTGCGCGGATTCAACGACCGTTTTACCAATAACCTGCTCGTCTTGATGGACGGAAGAATCCTTTATGATCCGCTATTTTCCGGTACGCACTGGGATATTCAGGACACCCCTTTTGAAGACATTGACCGAATAGAGGTTATCCGCGGTCCCGGAGGAACGATTTGGGGGTCGAACGCCGTGAACGGCGTCATCAACATCATCACCAAATCCGCCAAGGACACGCAGGGAGGCTATGTCTCGGGGGGCGGCGGGGACACGGAGAGGGCGTTCGGCGAATTCCGGTACGGCGGGAAGGCGGGGGATGTCCCTTTCAGGGTTTACAGCAAGTATACGAATCGTGACGACAGTCCCCAGGGCCATGATGAGTGGTATGCGGCGCGCGCCGGAGGACGGGCGGATTGGGACAATGGGGGAGACACCCGTTTCACGCTTCAGGGGGATGGCTATGAAGGGCAGATGGAGGCCACAATCACCCGCTGGTTTCGCACGGCTCCCCTGGCGGTTGTCGAGGACGTGCGGGAGGACGCGAGCGGCGGCAATGTGATGGGCCGCATGGTGAGGGAATTCAATGAAAAGTCGGACCTGCAAGCGCAGATGTACTATGACTACACTTTTCGCGGCTCGGCGCATGTGGAGCTAACGCGCCATACGGCGGATTTGGACGTGCAGTACCGGTTCCCCGCCTTTGACGCTCAGGAGGTGATTGTGGGCGGCGGTTATCGCGTCTCCTGGGATGAGACGGTGCCGTCGCTCGTGGCGCCGGTATCGGTGTTTATCCCGGCGGACAGGCATGACGATGTCTGGAGCTGGTTCGTGCAGGACGAAATCACGCTGATAGAGGATCTGCTTACTTTGACGATAGGCTCAAAGTTTGAAGTCAACGATTACACCGGCTTCGAATACCAGCCAAGCGCGAGCCTCGCGTATTTTATCGATGACAAAAGCACGTTGTGGGGCTCGGTGACCCGTGCGGTCAGGGTCCCGACACCGGCTGATGTGCACAGCGTGACGGAATTTCCCTCGCTTTTGGTGGGCGCCACGACGGTCACAACAAGAAACCGCGGCCAGGATGAGTTTAAGGCGGAAGAGATTATTTCGTATGAGTCCGGCTTCCGCACGCAGTTCTATGACAAGGTTTCCGTGGATCTGGCAAGCTTTTATAGCGAATACCGTGACTTGAGAACCGCTGAGTTGTACGGCCAGGAGATTCTCAACCCCTTTCCTACCAGACTCATTCAGAATGTTTCCCTGGAAAACAATCTCGAAGCCAGGACTTATGGCGGTGAGCTCTCGCTCAATTATTTTGTCACGAAGGACTGGCGGCTTTCGGGGGGGTACACTTATTTGTACATGCATTTGACGCCCGGGCCGACATCCGATGCATCGGAAGGAGTGGAGAAACGCAGTCCCCGGCACAGCGCCTTCGCGCAGTCTTTTATCCAGCTTCCGTGGAACTGGCAGTTAGACTCGGCGATTCGCTATGTCGATGAGCTCCGGGGTTTGAACGTCAAAAGTTACGTCGTGGCGGACGTGAGGCTGGCGTGGCAGCCGCGGCCCGACTGGGAACTTTCGCTTGCGGCAAGAAATTTATTCGCGACGGATCATTTGGAGTACATCCAGCCTTTATTTTTTGAAACCTTCGGGCTGGCGCGGCGGGTCGAGTCGAGCGTTTACGGCAAAGTAACGGTCAAATTCTAG
PROTEIN sequence
Length: 664
MPKKVVFVLALCLLVLSGRAFAVAAAPGLTELSLEELMNVEITSVSKTPQVLSRTAAAVHVISNEEIRRSGAATIPDLLRLVPGVQVVRIDANKWAVSVRGFNDRFTNNLLVLMDGRILYDPLFSGTHWDIQDTPFEDIDRIEVIRGPGGTIWGSNAVNGVINIITKSAKDTQGGYVSGGGGDTERAFGEFRYGGKAGDVPFRVYSKYTNRDDSPQGHDEWYAARAGGRADWDNGGDTRFTLQGDGYEGQMEATITRWFRTAPLAVVEDVREDASGGNVMGRMVREFNEKSDLQAQMYYDYTFRGSAHVELTRHTADLDVQYRFPAFDAQEVIVGGGYRVSWDETVPSLVAPVSVFIPADRHDDVWSWFVQDEITLIEDLLTLTIGSKFEVNDYTGFEYQPSASLAYFIDDKSTLWGSVTRAVRVPTPADVHSVTEFPSLLVGATTVTTRNRGQDEFKAEEIISYESGFRTQFYDKVSVDLASFYSEYRDLRTAELYGQEILNPFPTRLIQNVSLENNLEARTYGGELSLNYFVTKDWRLSGGYTYLYMHLTPGPTSDASEGVEKRSPRHSAFAQSFIQLPWNWQLDSAIRYVDELRGLNVKSYVVADVRLAWQPRPDWELSLAARNLFATDHLEYIQPLFFETFGLARRVESSVYGKVTVKF*