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RIFCSPHIGHO2_02_FULL_CP_51_18_RIFCSPHIGHO2_02_FULL_CP_51_18_rifcsphigho2_02_scaffold_852_11

Organism: Omnitrophica bacterium RIFCSPHIGHO2_02_FULL_51_18

near complete RP 46 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: 9603..11375

Top 3 Functional Annotations

Value Algorithm Source
rpoD; RNA polymerase sigma factor rpoD KEGG
DB: KEGG
  • Identity: 47.9
  • Coverage: 564.0
  • Bit_score: 472
  • Evalue 2.50e-130
HMM--K03086 similarity HMM
  • Identity: null
  • Coverage: null
  • Bit_score: 560
  • Evalue 2.80e-166

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Taxonomy

R_OP3X_51_18 → OP3X → Bacteria

Sequences

DNA sequence
Length: 1773
ATGAAAAAAAATAGAAAAAAAGCAGCAAAGAAAAAAACGAAACTGATCCGGAAAACCAAGCCTCTCCGCGGCGCGAGGGTCGCACAGGCCGCTTCTTTGTCTCCCGCCGCCGCGGTGCAGGCTCTTCGCGGGGAAGAGCAGGGCGATTCTTCGAAGCTGAAGCTCAATAAGGCCAAGAGCGTCGCCGAGCTCGTGGCGCTCGGCAAGGAAAAAGGCTTTCTGACCTACGACGATATCAACCGAATCCTGCCGTCCGATGTGACAGCTTCCGAGGATATCGACGATGTGCTCGTGGTTTTGACGCAGCAGCAAATTGAGGTTGTCGATTCCGAGGACGAGATGTCCAAGGATTCGGAGTCAGGCGGCAACGCCGACAAGAATCAGGACTCGGACGAGGTTGTCGAGCCGGAGGTTGAGGTCAAAAAGGAGGAACCCGAGGTGAATATATCCCCGGCCCGCCTTGAGCAAATGGACGACCCTGTCCGCATGTACTTGAGACAGATGGGACAGATCCCGCTTTTGACGCGTGAGCAGGAACTCGAGCTTGCCAAGCGCATCGAAGCGGATGAGCTTGAATTCAGAAAGGGTGTGTTCGAGTGCCATTATTCACGCGCGTTTATTTTAGAGTTTACGAATACGCTTTTAAAACGCAAATGCGACGTGGAAGAGTTTATTGAGGAAGATTTTAAGTTCCGTGACAATACGCCTCGCACGCTGAAGCGTCTTGAGACGCTTGCGCGGCGCTTAAGAGGAGCGAAAAAGAACACCCTCACGCTCAATCTTCTTTTGGAATTCAAGGTCAGCCCCCGTATCGTCGAAGAGATTTTTCATGAAATCCGAAAAGGCTTGAACGACCTCGAGAAAATCGAGAAGGACATCGTGAAGCACCGCAAGAAAAGAGAGCGTGCCCCTGTCGGCAGGCTTTTGAAAGAACGGCGCCGGCTCCTATGGGAATTCGGCGAAAAAAGCACTGAAGAGCTTAAAGCGCGGTATTTGACGATCAAGAGGAAAGAAAATAAATACCAGCGGGCGAAAAAGGAGCTTGTGGAAGCCAATCTTCGTCTTGTGGTAAGCATTGCCAAGAAATACACCAACCGCGGGCTTTCTTTTCTTGATCTCATCCAAGAAGGCAACATCGGCCTCATGAAGGCCGTGGACAAGTTCGAATACAAGCGCGGTTATAAATTCAGCACTTACGCAACGTGGTGGATCCGTCAGGCCGTGACGCGTTCGATCGCCGACCAGGCACGCACCATCCGCATTCCGGTGCACATGACCGAGACCATCAATAAACTGATCCGTGTTTCGCGCACGTTGGTTCAGGAGACGGGCCGAGAGCCGAGCCCTGAAGAAATCGGACAGCGCATGCGGATGGGCGTTCAAAAAGTCAGAGAAATACTGAAGATTGCCCAGGAGCCTATCTCGCTTCAGACACCGATCGGGGATGAGGGGGACACGCACTTTGGCGATTTTATCGAAGACAAGCGCGCGGTTTCCCCGGCAAGCGCCACGACCTACGCGATGCTGAGGGAGCAGATGGATGATGTGCTTCAGACGCTGACGGAAAGGGAAAGCAGGGTGCTTAAACTGCGCTTTGGCATCACGGACGGTTATCCGAGGACGCTTGAGGAAGTTGGCTCCATCTTCAATGTGACCCGCGAACGCGTGCGTCAGATCGAGGCAAAAGCGCTCAGGAAGCTGCGTCACCCGACCCGTTCCAGGAAACTTAAGACATTTCTTGAGCTCGGTGCCGCCGAAGAGCTTGAGTTCTGA
PROTEIN sequence
Length: 591
MKKNRKKAAKKKTKLIRKTKPLRGARVAQAASLSPAAAVQALRGEEQGDSSKLKLNKAKSVAELVALGKEKGFLTYDDINRILPSDVTASEDIDDVLVVLTQQQIEVVDSEDEMSKDSESGGNADKNQDSDEVVEPEVEVKKEEPEVNISPARLEQMDDPVRMYLRQMGQIPLLTREQELELAKRIEADELEFRKGVFECHYSRAFILEFTNTLLKRKCDVEEFIEEDFKFRDNTPRTLKRLETLARRLRGAKKNTLTLNLLLEFKVSPRIVEEIFHEIRKGLNDLEKIEKDIVKHRKKRERAPVGRLLKERRRLLWEFGEKSTEELKARYLTIKRKENKYQRAKKELVEANLRLVVSIAKKYTNRGLSFLDLIQEGNIGLMKAVDKFEYKRGYKFSTYATWWIRQAVTRSIADQARTIRIPVHMTETINKLIRVSRTLVQETGREPSPEEIGQRMRMGVQKVREILKIAQEPISLQTPIGDEGDTHFGDFIEDKRAVSPASATTYAMLREQMDDVLQTLTERESRVLKLRFGITDGYPRTLEEVGSIFNVTRERVRQIEAKALRKLRHPTRSRKLKTFLELGAAEELEF*