ggKbase home page

RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_229_34

Organism: Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_02_FULL_41_150

near complete RP 47 / 55 MC: 1 BSCG 44 / 51 ASCG 10 / 38
Location: comp(29284..31869)

Top 3 Functional Annotations

Value Algorithm Source
mucin-associated surface protein (MASP) Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 861.0
  • Bit_score: 1686
  • Evalue 0.0
transmembrane_regions id=5227392 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria) similarity UNIREF
DB: UNIREF100
  • Identity: 26.1
  • Coverage: 671.0
  • Bit_score: 207
  • Evalue 7.70e-50
tolA; membrane protein similarity KEGG
DB: KEGG
  • Identity: 30.5
  • Coverage: 200.0
  • Bit_score: 63
  • Evalue 3.00e-07

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_OD1_Nomurabacteria_40_42 → Nomurabacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 2586
ATGTCACAAAATAATTTAACACGAAATACAACAAAATCCCCAACTATTCGTAAATTGCTTCTAACGGGATTGATACTGCTTATCCTCGTCGGACTTTTTGGGCCGGGAGGGAAACAAGTGGAGGCGCAACCAGCACCTACACCAACACCTGTGGTAGCAACGGGAACTTGTCAGCGCACGAGTGGAATAACATACATAGCACCTTTCCCCTCCACTCCAGAGAACTGTCGTGGTATAGGTATTTTTACTCCATACAGCCCTAGCAATCCTGCGCCAGCAACACCAGCAACCCTAGCAGCAGGGGCGACAGGAACAACACCAAAAACAGAAGCTGATACATTTAGAGGAGAAATTAATAACGGTTGCGGAGCTACTTTTGATTTATCTCAACTTGTGAAGGGATGTTTTTTATGGATTGTTTACTACACTTACTTCCAACTCCCAAATTTACTGCTTATATTGTCTGCAAACTTCTTTAATGCCATGGTGTCTGTTGGGATAAATAAGCTAGCGGTCTTGACCGACTCGGGTTTCGTATCTAGCGCTTGGGCTGTAGTGCGTGATCTTTCTAATATTTTTTTCATCCTTATTTTACTTTATGTAGCGATTCAAACAATTTTAGGGATAGGACATGAAACTAAAAAGGCGGTAGTTTGGGTAATAATCATGGCTTTACTTATAAACTTTTCAATGTTTTTCACAAAAGTGGTTATAGATTCTTCTAATATTCTGGCTTTGGTTTTCTATAATAAACTGAAAGTTAACCCAGGAAGACAAAAAGTGTATGATCAATCTGCAGGCAGTACAGAAAAAGATATATCTGGCGAGATAGTTGAGGCATTTAACCCTACTAAGCTGGTAGACTTTCCTACACTTAAAAAACTGAAAACAATAACGGTATTAGGCGAAAAAACAGAATCAAAAGAAAACCTTCCTTTCGGGTTGACACTTGGATTAATGATCATCTCTGGATCTATCATGTTCTTTGCTGCCTTCGCTTTTTTCGTCGCCGGAGCCGCATTTTTGGGCAGGTTGCTCGAACTTTGGGCTTTGATCATTTTTGCCCCTTTCGCTTTTATGTCTTTCGCCTTACCGGCACTTCAAGGTGTGGAATATCTGGGCTGGAACGCCTGGCATAAACGTTTGATTAAAATGTCTTTTATGGCTCCAGTTTTTATGTTTTTTATGTATTTGATATTTATGTTATTGAAGGAATATTCGAAAATGAAACTTCTGACTGGTGAAGGATTTATCCCGTATATATTGTCTTTAATATTGCCGGCATTAATAAGCATGTTTCTGCTTCTCAAAGCGATCCACTTTGCTAAAGCGGCAGGAGGAAAAATTGCAGAGATAGCATCAGGAATTGGTAAGGTGGTCACCGGACTTGCCATCGGCGCAGCGACCGGCGGAACGATGATGGTTGGGGCCAAAGTCCTGCAGGGAACTGCTGGGCATTTAGGTAAAAAAGTTTTTGACAGTACAAAGATGCAAGATTGGGAAACAAAGGGCAATTGGGCCCAGAGACGTTTGGCTAGTATGGGAAGAACTATCGCAGGTGGAGATGATGGCAAGGGAGGATTTGCGGGTTCGAGTTTTGATATAAGAAAGGGTGCGTTTGGCGGAGCTTTTGGTGCTGTATCTAAAATAACCGGGGTCAACTTAGGAGGAGGAAAATACCTTTCAACGGAAGAGGGTGGATACATGGCTGATTTGAAGGGACGAGACGAAAAGAGAAAGAAGAGAGCTGCAGGACTTAAAACCAAGGAAGGCGAAAAAGAGAAACAGGAATTAAATGCAGCTGAAGACGCGATTCAGGCCCTCTCCTTGGAAAGTTCACACGAACTTGAGCAACTTAATAAAAAGATTGAGTCGGCAAGAAAAAATGCAAGTGACTTAAATTCAAGAGATACTACTGATTCTAATAAGGTTGCAACTAGAGAAGCTGCCATAAGTGCTGCAAGAGCAATGGCTGATACCGATCCTGCTAAGCAAAACACTTTGGCATCGGCTATGGCTATGGATGTTAATGATCCTGCTAAAGTTGCAGCTAAGAAAGCAGCAAATGATAAACTGGCAACGTTAAAAGAATTCAAGGATAAGATAAAGAAGGCAACAGGAGATGTTAATAGGGTCTCTGAATTAGAGGCAGAGGCGGAAAGAGCAGAGGCGGCGGCATTGGCAGCTATTACAGCCGGAGCCTCCAACGCTTCGGAATTGGAAAATGCAGCAGCAGTAGCAAAGGCAGCACTTGCTTCTGCCAAACATGGTGGCGGAAGATCAATGGATCAACTTGAAGATAAAATAATTCCAGATCTTCAACATAAGGTAAAAGAAGTTGGAGAGAAAAGAATAAGAGCATTTGCCAATGATATTGAAAATTCATTTGCCTGGCCTTGGAACAAAGCCGCGCGTAGAGAGTCTGCTCATGCAATAAGAATGGGAGTAAAACCAAAAGAAGAAAAAACTGACGTACATACGCCAGGAGCAGAATTTGGCAGAGACTTAGCAGCTGCAGCTTTAGCAGAAGCATTTATTGGAGGTGGTCGTCCTCCTGAACATCCTCCACACCCTCCACATCCTTAA
PROTEIN sequence
Length: 862
MSQNNLTRNTTKSPTIRKLLLTGLILLILVGLFGPGGKQVEAQPAPTPTPVVATGTCQRTSGITYIAPFPSTPENCRGIGIFTPYSPSNPAPATPATLAAGATGTTPKTEADTFRGEINNGCGATFDLSQLVKGCFLWIVYYTYFQLPNLLLILSANFFNAMVSVGINKLAVLTDSGFVSSAWAVVRDLSNIFFILILLYVAIQTILGIGHETKKAVVWVIIMALLINFSMFFTKVVIDSSNILALVFYNKLKVNPGRQKVYDQSAGSTEKDISGEIVEAFNPTKLVDFPTLKKLKTITVLGEKTESKENLPFGLTLGLMIISGSIMFFAAFAFFVAGAAFLGRLLELWALIIFAPFAFMSFALPALQGVEYLGWNAWHKRLIKMSFMAPVFMFFMYLIFMLLKEYSKMKLLTGEGFIPYILSLILPALISMFLLLKAIHFAKAAGGKIAEIASGIGKVVTGLAIGAATGGTMMVGAKVLQGTAGHLGKKVFDSTKMQDWETKGNWAQRRLASMGRTIAGGDDGKGGFAGSSFDIRKGAFGGAFGAVSKITGVNLGGGKYLSTEEGGYMADLKGRDEKRKKRAAGLKTKEGEKEKQELNAAEDAIQALSLESSHELEQLNKKIESARKNASDLNSRDTTDSNKVATREAAISAARAMADTDPAKQNTLASAMAMDVNDPAKVAAKKAANDKLATLKEFKDKIKKATGDVNRVSELEAEAERAEAAALAAITAGASNASELENAAAVAKAALASAKHGGGRSMDQLEDKIIPDLQHKVKEVGEKRIRAFANDIENSFAWPWNKAARRESAHAIRMGVKPKEEKTDVHTPGAEFGRDLAAAALAEAFIGGGRPPEHPPHPPHP*