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RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3339

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Displaying items 61-90 of 97 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3339_58
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

57562..58809
DNA (1248bp) protein (416aa)
cell division protein FtsA; K03590 cell division protein FtsA Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
rrs:RoseRS_3793 cell division protein FtsA; K03590 cell division protein FtsA id=8903 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
cell division protein FtsA
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3339_59
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

58881..60038
DNA (1158bp) protein (386aa)
cell division protein FtsZ; K03531 cell division protein FtsZ Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Cell division protein FtsZ id=1889037 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
cell division protein FtsZ
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3339_60
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

60144..60545
DNA (402bp) protein (134aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3339_61
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

60545..61654
DNA (1110bp) protein (370aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3339_62
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

61773..62012
DNA (240bp) protein (80aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3339_63
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

62024..62440
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2AUC1_9BACT
putative toxin-antitoxin system toxin component, PIN family Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
putative toxin-antitoxin system toxin component, PIN family
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3339_64
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(62760..62873)
DNA (114bp) protein (38aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3339_65
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

63312..63758
DNA (447bp) protein (149aa)
Transcriptional repressor NrdR n=1 Tax=uncultured bacterium RepID=K1Y6T3_9BACT
nrdR; transcriptional regulator NrdR; K07738 transcriptional repressor NrdR Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
nrdR; transcriptional regulator NrdR
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3339_66
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

63878..66412
DNA (2535bp) protein (845aa)
ribonucleoside-diphosphate reductase class II Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Ribonucleoside-diphosphate reductase id=3486150 bin=GWA1_ZB2_49_26 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
ribonucleoside-diphosphate reductase class II
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3339_67
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

66487..66678
DNA (192bp) protein (64aa)
excinuclease ABC C subunit domain-containing protein; K07461 putative endonuclease Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
excinuclease ABC C subunit domain protein; K07461 putative endonuclease id=17068 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
excinuclease ABC C subunit domain-containing protein
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3339_68
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

66647..67117
DNA (471bp) protein (157aa)
DNA mismatch repair protein MutT
NUDIX hydrolase Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
NUDIX hydrolase id=5227251 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3339_69
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

67114..67668
DNA (555bp) protein (185aa)
cob(I)yrinic acid a,c-diamide adenosyltransferase (EC:2.5.1.17) Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
cob(I)alamin adenosyltransferase; K00798 cob(I)alamin adenosyltransferase [EC:2.5.1.17] id=32091 bin=ACD28 species=ACD28 genus=ACD28 taxon_order=ACD28 taxon_class=ACD28 phylum=PER tax=ACD28 organism_group=PER (Peregrinibacteria) organism_desc=PER
cob(I)yrinic acid a,c-diamide adenosyltransferase (EC:2.5.1.17)
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3339_70
R_SM2F11_48_13, SM2F11, Bacteria

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67702..68109
DNA (408bp) protein (136aa)
transmembrane_regions 7..24 Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
transmembrane_regions 7..24 id=67279 bin=ACD48 species=ACD48 genus=ACD48 taxon_order=ACD48 taxon_class=ACD48 phylum=OP11 tax=ACD48 organism_group=OP11 (Microgenomates) organism_desc=OP11
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3339_71
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

68177..68704
DNA (528bp) protein (176aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Uncharacterized protein id=3794665 bin=GWB1_Berkelbacteria_38_5 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWB1_Berkelbacteria_38_5 organism_group=ACD58 (Berkelbacteria)
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3339_72
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

69057..69905
DNA (849bp) protein (283aa)
Ribose-phosphate pyrophosphokinase n=1 Tax=Pyrococcus sp. ST04 RepID=I3RCN2_9EURY
ribose-phosphate pyrophosphokinase Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
ribose-phosphate pyrophosphokinase
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3339_73
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

69902..70537
DNA (636bp) protein (212aa)
phosphoribosyltransferase; K00762 orotate phosphoribosyltransferase [EC:2.4.2.10] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
pyrF; orotidine 5'-phosphate decarboxylase (EC:4.1.1.23); K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] id=5799 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
phosphoribosyltransferase
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3339_74
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

70521..71318
DNA (798bp) protein (266aa)
orotidine 5'-phosphate decarboxylase; K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Orotidine 5'-phosphate decarboxylase n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NQ48_GRAMM
orotidine 5'-phosphate decarboxylase
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3339_75
R_SM2F11_48_13, SM2F11, Bacteria

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71327..72340
DNA (1014bp) protein (338aa)
dihydroorotate dehydrogenase (EC:1.3.98.1); K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
dihydroorotate dehydrogenase (EC:1.3.98.1)
Dihydroorotate dehydrogenase (quinone) n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S5A5_PEDSD
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3339_76
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

72337..73560
DNA (1224bp) protein (408aa)
Allantoinase; K01465 dihydroorotase [EC:3.5.2.3] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Allantoinase n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NQ49_GRAMM
Allantoinase
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3339_77
R_SM2F11_49_9, SM2F11, Bacteria

Not on your lists

73557..74591
DNA (1035bp) protein (345aa)
carA; Carbamoylphosphate synthase small subunit; K01956 carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] Tax=RIFCSPHIGHO2_01_FULL_SM2F11_49_9_curated
carbamoyl-phosphate synthase, small subunit (EC:6.3.5.5); K01956 carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] id=5085564 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
carA; carbamoyl-phosphate synthase small subunit (EC:6.3.5.5)
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3339_78
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

74588..77845
DNA (3258bp) protein (1086aa)
pmz:HMPREF0659_A5879 carB; carbamoyl-phosphate synthase, large subunit (EC:6.3.5.5); K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] id=42158 bin=ACD37 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=ACD37 organism_group=OP11 (Microgenomates) organism_desc=OP11
carbamoyl-phosphate synthase, large subunit Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
carbamoyl-phosphate synthase, large subunit
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3339_79
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

77842..78753
DNA (912bp) protein (304aa)
aspartate carbamoyltransferase; K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
aspartate carbamoyltransferase
Aspartate carbamoyltransferase id=2193981 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3339_80
R_SM2F11_48_13, SM2F11, Bacteria

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78768..79106
DNA (339bp) protein (113aa)
Putative uncharacterized protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N8S5_9ARCH id=5103663 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DoxX Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3339_81
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(79087..79809)
DNA (723bp) protein (241aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02CZ5_SOLUE
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3339_82
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists


79827..81110
DNA (1284bp) protein (428aa)
histidyl-tRNA synthetase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
ttr:Tter_1240 histidyl-tRNA synthetase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] id=42963 bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3339_83
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

81181..82560
DNA (1380bp) protein (460aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FU69_9BACT
comEC; DNA internalization competence protein; K02238 competence protein ComEC Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
comEC; DNA internalization competence protein
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3339_84
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

82538..83404
DNA (867bp) protein (289aa)
DNA internalization-related competence protein ComEC/Rec2; K02238 competence protein ComEC Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein id=5801462 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
DNA internalization-related competence protein ComEC/Rec2
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3339_85
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

83426..84016
DNA (591bp) protein (197aa)
Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family (EC:5.2.1.8) Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
peptidylprolyl isomerase n=1 Tax=Marinimicrobia bacterium JGI 0000039-D08 RepID=UPI0003A18F2C
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3339_86
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

84013..84603
DNA (591bp) protein (197aa)
nucleoside diphosphate kinase (EC:2.7.4.6); K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
nucleoside diphosphate kinase (EC:2.7.4.6)
hypothetical protein n=1 Tax=candidate division OD1 bacterium SCGC AAA011-G05 RepID=UPI000373148B
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3339_87
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(84656..86149)
DNA (1494bp) protein (498aa)
relA; GTP pyrophosphokinase (EC:2.7.6.5); K00951 GTP pyrophosphokinase [EC:2.7.6.5] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
relA; GTP pyrophosphokinase (EC:2.7.6.5)
hypothetical protein id=5801522 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
Displaying items 61-90 of 97 in total

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