ggKbase home page

RIFCSPHIGHO2_12_Acinetobacter_41_5_rifcsphigho2_12_sub10_scaffold_4281_1

Organism: Acinetobacter sp. RIFCSPHIGHO2_12_41_5

near complete RP 44 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(55..669)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase factor sigma-70 n=3 Tax=Acinetobacter johnsonii RepID=D0SA91_ACIJO similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 204.0
  • Bit_score: 404
  • Evalue 4.60e-110
DNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein Tax=RIFCSPHIGHO2_12_FULL_Pseudomonadales_40_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 204.0
  • Bit_score: 408
  • Evalue 4.40e-111
DNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein similarity KEGG
DB: KEGG
  • Identity: 81.9
  • Coverage: 204.0
  • Bit_score: 336
  • Evalue 5.60e-90

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RHI_Pseudomonadales_40_16 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 615
ATGGATTTAGCACCCAAACAGTCTAAAACGCAAGATTGTAGTACTCTTAAGAGTACCGCTGAGTCTCGCCTAAAAAACTTCATGCAAGAAGTGACTGGTCGTGCGTTAGTAATGATGGAAAGTGCCACCCAAAACCAGCAGGGTATCGCCATGGATTTGGTGCAAGAAGCCTTTATTTCATTACATAAATCTTATTCTGATCGATCTACGGAAGAATGGTATCCACTGTTCTATACCATTTTAACCAACAAATTACAGGATTGGCGTCGTAAAGAAGCACGTCGAGCACAACCCTTTTCTTTCTTTAAAAAAGTCAGTCTTGATGATGACGATTTTGAAGTCAATGAGGTGGTCGATGAAAGAGCGCTGAATCCTTCAGACTTTTTAAGTCAAGCTGTCACTGCTGATGAAATTCAAGAAGCCATTGCTGGTCTTCCTGTTCGTCAGCAGCAAGCATTTATGTTACGTGCATGGGAAGGTTTTGATACTGCAACCACTGCACAAATCATGAATTGCTCTGAAGGCAGCGTTAAAACTCATTACCACCGTGCGATTCAAGGCTTACGCAATGCTCTCGCACATTTGAATCCACATCTAGGAGGATCATCCGAATGA
PROTEIN sequence
Length: 205
MDLAPKQSKTQDCSTLKSTAESRLKNFMQEVTGRALVMMESATQNQQGIAMDLVQEAFISLHKSYSDRSTEEWYPLFYTILTNKLQDWRRKEARRAQPFSFFKKVSLDDDDFEVNEVVDERALNPSDFLSQAVTADEIQEAIAGLPVRQQQAFMLRAWEGFDTATTAQIMNCSEGSVKTHYHRAIQGLRNALAHLNPHLGGSSE*