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RIFCSPHIGHO2_12_Acinetobacter_41_5_rifcsphigho2_12_sub10_scaffold_15616_4

Organism: Acinetobacter sp. RIFCSPHIGHO2_12_41_5

near complete RP 44 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(1813..3009)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Acinetobacter lwoffii RepID=UPI0002624299 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 398.0
  • Bit_score: 778
  • Evalue 3.00e-222
rpoD; sigma D (sigma 70) factor of RNA polymerase, major sigma factor during exponential growth; K03086 RNA polymerase primary sigma factor Tax=RIFCSPHIGHO2_12_FULL_Pseudomonadales_40_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 398.0
  • Bit_score: 778
  • Evalue 4.20e-222
rpoD; sigma D (sigma 70) factor of RNA polymerase, major sigma factor during exponential growth similarity KEGG
DB: KEGG
  • Identity: 93.0
  • Coverage: 398.0
  • Bit_score: 727
  • Evalue 2.20e-207

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Taxonomy

RHI_Pseudomonadales_40_16 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1197
AAAGCGCGCTTTGACGAACTGACTGCTGCTTGGAAAAACACCCGAACCATCATCGAGAAACATGGTCGTTCAAGCAAAGAAGCAGAAGACGCTTTAGAGTCACTTGCAACTGTGTTTATGATGTTCAAATTTACACCACGTTTATTTGACATCATTTCAGAAATGATTCGTGGTACACATGAACAAATCCGTACCTCTGAACGTGAAGTAATGCGCTATGCAGTACGTCGTGGTCGTATGGATCGTACTCAATTCCGTACCTCTTTCCCAGGTCAAGAGTCAAACTTTGCTTGGTTAGATGAACAAATTGCGAAAGCTTCGCCAGACCAAAAAGGCTATCTTGAAAAAGTACGCCCTGACGTTTTAGCGTTCCAACAAAAAATTGCAGACATTGAAAAAGATTTGGGCCTTGATGTTAAAGGCATCAAAGAGATTTCAAAACGTATGGCTGTAGGCGAAGCGAAAGCACGCCGCGCGAAAAAAGAAATGGTTGAAGCGAACTTACGTTTGGTCATCTCGATTGCGAAAAAATATACCAACCGTGGCTTACAATTCTTGGACTTGATCCAAGAAGGTAACATTGGTTTGATGAAAGCGGTAGACAAGTTTGAATACCGTCGTGGTTATAAGTTCTCGACTTATGCAACGTGGTGGATTCGTCAGGCCATTACTCGTTCGATTGCCGACCAAGCACGTACCATTCGTATTCCAGTACACATGATCGAAACCATTAACAAGATCAACCGTGTATCACGCCAACTTCTGCAAGAAATGGGCCGTGAACCAACACCTGAAGAACTCGGTGAACGTTTGGAAATGGATGAAGTTAAAGTGCGTAAAGTGCTGAAAATCGCCAAAGAACCAATTTCGATGGAAACACCGATTGGTGATGATGAAGATTCGCATTTGGGTGACTTCATTGAAGACAGCAACATCACTTCACCTGTCGATGCTGCAACGTCTGAAGGCTTAAAAGAAGCAACGCGTGAAGTGCTTGAAAACTTGACTGAACGTGAAGCGAAAGTCTTGAAAATGCGTTTTGGTATCGACATGCCAACGGACCATACTTTGGAAGAAGTAGGTAAACAGTTTGACGTGACACGTGAACGTATTCGTCAGATTGAAGCGAAAGCACTGCGTAAATTACGTCACCCTTCTCGCTCTGAACACTTACGTTCATTCCTAGAAAACGACTAA
PROTEIN sequence
Length: 399
KARFDELTAAWKNTRTIIEKHGRSSKEAEDALESLATVFMMFKFTPRLFDIISEMIRGTHEQIRTSEREVMRYAVRRGRMDRTQFRTSFPGQESNFAWLDEQIAKASPDQKGYLEKVRPDVLAFQQKIADIEKDLGLDVKGIKEISKRMAVGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKINRVSRQLLQEMGREPTPEELGERLEMDEVKVRKVLKIAKEPISMETPIGDDEDSHLGDFIEDSNITSPVDAATSEGLKEATREVLENLTEREAKVLKMRFGIDMPTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEHLRSFLEND*