ggKbase home page

RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_60_33_rifcsphigho2_12_scaffold_1637_34

Organism: Candidatus Muproteobacteria bacterium RIFCSPHIGHO2_12_FULL_60_33

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(28988..29998)

Top 3 Functional Annotations

Value Algorithm Source
RluA family pseudouridine synthase (EC:3.2.1.17); K06179 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 336.0
  • Bit_score: 673
  • Evalue 1.60e-190
RluA family pseudouridine synthase (EC:3.2.1.17); K06179 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 336.0
  • Bit_score: 673
  • Evalue 1.60e-190
RluA family pseudouridine synthase (EC:3.2.1.17) similarity KEGG
DB: KEGG
  • Identity: 58.6
  • Coverage: 319.0
  • Bit_score: 369
  • Evalue 1.30e-99

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Gamma2_60_33 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1011
ATGGACTCCCCAGCAATCTGTTATTATCGCCCCGGCATGAAAAAGGCCGTAGACCCCGCCACTCCCGCCGTCCGTTACCTCGAAATCGATGAAACCCGCGCCGGCCAGCGGCTCGACAATTTCCTGATCGCCACCCTCAAAGGTGTTCCCAAGAGCCATATTTACCGCATCCTGCGCAAGGGTGAGGTGCGAATTAACAAAGGCCGGGCGCGCCCGGACTACCGCCTGGAAGAGGGGGACGTGGTGCGGATACCCCCCTTGCGACAGGCGCCCCCGCCGCTCAAGGCCGGGGGGCCGGAGGCCGCGGAAGGATATGCCTGGCTGCTGCCGCGCATCCTGTTCGAGGATGACGACCTGATGGTGGTCAACAAGCCGGCCGGGCTGGCCGTGCATGCGGGCAGCGGCGTCAGCGTGGGGCTGATCGAGGCCCTGCGTGGACTGCGACCGCAGGCACCATTTCTGGAACTGGCGCACCGCCTGGACCGCGAAACCTCGGGTTGCCTGCTGTTGGCCAAGAGTCGGCCGGCATTGATCGCGCTGCACCGGATGTTGCGTGACGGCAAGATGGAGAAGCGCTATCTCGCCCTGGTCGCCGGAACCTGGCGCGGCGGCGCGCGCGCGGTCAGGGCGTCGCTGGAGAAAAACCGTCCGCGGTCGGGCGAGCGCATGGTGGAGGTTTCCGAAGACGGCAGGGAGGCGGCGAGTCATTTCACGCCACAGCAACGCTTCGGATCGGCCTCGCTCATGGAGATCCGGCTGCTCACCGGACGCACCCATCAGGCGCGGGTGCACGCGGCCCATCTGGGCCATCCGATTGCGGGGGACGACAAATACGGCGATCGTGAATTCAACCGGCGCCTGCAGCGGCTTGGGCTGAAGCGCATGTTTCTGCACGCCCAGCGGCTGCGATTCATGCATCCGGTGAACGGTTGTAAAATGGATGTGGAAGCCCCGCTTCCCGCCGAACTTTCTTCCTTGCTTGAACGCCTCGCGCATGAAACTGCCTCGTGA
PROTEIN sequence
Length: 337
MDSPAICYYRPGMKKAVDPATPAVRYLEIDETRAGQRLDNFLIATLKGVPKSHIYRILRKGEVRINKGRARPDYRLEEGDVVRIPPLRQAPPPLKAGGPEAAEGYAWLLPRILFEDDDLMVVNKPAGLAVHAGSGVSVGLIEALRGLRPQAPFLELAHRLDRETSGCLLLAKSRPALIALHRMLRDGKMEKRYLALVAGTWRGGARAVRASLEKNRPRSGERMVEVSEDGREAASHFTPQQRFGSASLMEIRLLTGRTHQARVHAAHLGHPIAGDDKYGDREFNRRLQRLGLKRMFLHAQRLRFMHPVNGCKMDVEAPLPAELSSLLERLAHETAS*