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RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_5636_23

Organism: Candidatus Colwellbacteria bacterium RIFCSPHIGHO2_12_FULL_44_17

near complete RP 43 / 55 MC: 1 BSCG 44 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: 23797..24351

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-subfamily sigma factor n=3 Tax=Streptomyces RepID=D6KA62_9ACTO id=133419 bin=ACD81 species=unknown genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1 similarity UNIREF
DB: UNIREF100
  • Identity: 46.9
  • Coverage: 179.0
  • Bit_score: 165
  • Evalue 7.20e-38
RNA polymerase ECF-subfamily sigma factor n=3 Tax=Streptomyces RepID=D6KA62_9ACTO id=133419 bin=ACD81 species=unknown genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1 similarity UNIREF
DB: UNIREF100
  • Identity: 46.9
  • Coverage: 179.0
  • Bit_score: 165
  • Evalue 7.20e-38
ECF subfamily RNA polymerase, sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 184.0
  • Bit_score: 364
  • Evalue 6.60e-98

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Taxonomy

RHI_OD1_44_17 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 555
ATGCAGGACGAGCGCGAACTTATACAACGATCAAAGGAGGGTGAGGGCGAAGCCTTTGGTTTGCTTTACGACCTATATCTACCAAAGATATATCGCTTCGTCCTTTTTAAGGTAAACCATCGTGAGGAGGCTGAAGACCTCACCCACCAGACCTTTATGCAGGCTTGGGAAAAGATTGGAACGTATGTCCACGGAGACTTTCCCTTTTCAAGCTGGCTTTATCGGATTGCGCGGAATTTGGTTATTGACCATTACCGTAAGTCGAAACCGACAGTCAGTATTGAGACGATTGAAGTCTCAGAAGAGCGAGTACTTTCTTACGAACCCTCGAACGCGGCGCGGCTTGATTTAGAGCAAGAGCAAGCGGCTGTTTTTCGAGCAATTCAAAAGCTTACTCCTAGCCAGCAGGACGTTATTATCATGCGATTTGTCGATGAGCTTTCTCTTAAAGAAACAGCCGCGGCAATCCATAAAAGCGAGGGCGCGGTTAAGCTTCTTCAACACCGAGCGCTTATGAATCTGAAGAAATTACTTCGAGATGGAACCAATTCTTAA
PROTEIN sequence
Length: 185
MQDERELIQRSKEGEGEAFGLLYDLYLPKIYRFVLFKVNHREEAEDLTHQTFMQAWEKIGTYVHGDFPFSSWLYRIARNLVIDHYRKSKPTVSIETIEVSEERVLSYEPSNAARLDLEQEQAAVFRAIQKLTPSQQDVIIMRFVDELSLKETAAAIHKSEGAVKLLQHRALMNLKKLLRDGTNS*