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RIFCSPHIGHO2_12_FULL_Sulfuricurvum_44_8_rifcsphigho2_12_scaffold_227993_2

Organism: Sulfuricurvum sp. RIFCSPHIGHO2_12_FULL_44_8

near complete RP 40 / 55 MC: 1 BSCG 43 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(585..1595)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Helicobacter macacae MIT 99-5501 RepID=V8C7M8_9HELI similarity UNIREF
DB: UNIREF100
  • Identity: 33.1
  • Coverage: 326.0
  • Bit_score: 170
  • Evalue 4.10e-39
rpoD; RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 34.9
  • Coverage: 315.0
  • Bit_score: 170
  • Evalue 1.10e-39
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1357400 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterale similarity UNIPROT
DB: UniProtKB
  • Identity: 33.1
  • Coverage: 326.0
  • Bit_score: 170
  • Evalue 5.70e-39

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Taxonomy

Helicobacter macacae → Helicobacter → Campylobacterales → Epsilonproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1011
ATTACGAATTACCTTGAAAAAGGCAAGCTGACCAAGGTACAGCAGAGGACTTTCAAGCGACTTGTTAACAAGATGACGAGGGAATTTCGTTTGCTTGAAGCTCCGCGATCTTGGGCCAAGTCGATTACATTTGGTGTTACGAACCCGGATGAATTTCTTCAGAATGACGCGTATGAAGGTTTCTTTAAAATTGTGAAAGATGATGAGTATCGCAAGTGGGGCAGGATGGTAAATGGGCAGGCTGAGTTCGTTCAGAAGATGAAGAATGACTTCATCGAGGATAATACTGGACTTATTGGGTCTATTGTTTCCAAGCGGATCAGGGGTGGGTATCTGAGCATTCCTCAGACGGATCTAATGCAAGAAGGTACTTTTGGCTTGCTCAAGGCGGTTAATAAGTTTGACTATACGATGGGGATTAAGTTCTCTACGTATGCTGCCTGGTGGGTCCGGCACGCGGTAACCCGAGCCATCCATGATAAGGATCGTATGATCAGGGTTCCCGTCCATATCAGTGATAAGGCTTATCGTGTTCGCACTATTATGTATGATTATCAGGCTCTCCATGGAGAATTGCCTTCCGTCGAGTATCTCGCTGAGTCTGTCAATACTACGGCGGTAGTGGTAAAGAGTATTATTGAATCGATCAAGATTTTTAGTATGGACGCGCCGATCACGACTTCTGAAGATGACGCACATGATTGGTATGGAGTTACTGCCGATCCGAAAGCCAATACGGCGATGGATGTTGTGTGCGACAATGAGGTCAAGAGCTTTCTCATTGAGGCGATGAAAGGGCTGTCTGCTCGTGAGCGGGCTGTAATTCGTGGTCGATTTGGGATCGATGGTGACCAGTTTACGGATGACACCGCTACCTTGAGGGAGATTGGTGATGATTTTAAGCTCTCCCGAGAGAGGATTCGTCAGGTGGAAGCTGACGCTCTAAATAAGCTGAGAAGTTTTATGCGATCCCGACGAGTCTTCAACAGAACTGATATTGCTGCCAATTAA
PROTEIN sequence
Length: 337
ITNYLEKGKLTKVQQRTFKRLVNKMTREFRLLEAPRSWAKSITFGVTNPDEFLQNDAYEGFFKIVKDDEYRKWGRMVNGQAEFVQKMKNDFIEDNTGLIGSIVSKRIRGGYLSIPQTDLMQEGTFGLLKAVNKFDYTMGIKFSTYAAWWVRHAVTRAIHDKDRMIRVPVHISDKAYRVRTIMYDYQALHGELPSVEYLAESVNTTAVVVKSIIESIKIFSMDAPITTSEDDAHDWYGVTADPKANTAMDVVCDNEVKSFLIEAMKGLSARERAVIRGRFGIDGDQFTDDTATLREIGDDFKLSRERIRQVEADALNKLRSFMRSRRVFNRTDIAAN*