ggKbase home page

rifcsplowo2_01_scaffold_25254_5

Organism: RIFCSPLOWO2_01_FULL_Archaea_Woesearchaeota_34_320

near complete RP 35 / 55 MC: 3 BSCG 5 / 51 ASCG 31 / 38 MC: 1
Location: comp(2280..2810)

Top 3 Functional Annotations

Value Algorithm Source
Small-conductance mechanosensitive channel n=2 Tax=Thermococcus RepID=G0HKF9_THES4 id=5103554 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 36.4
  • Coverage: 176.0
  • Bit_score: 138
  • Evalue 5.30e-30
mscS; mechanosensitive channel protein; K03442 small conductance mechanosensitive channel Tax=AR17 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 176.0
  • Bit_score: 333
  • Evalue 2.00e-88
Small-conductance mechanosensitive channel similarity KEGG
DB: KEGG
  • Identity: 36.4
  • Coverage: 176.0
  • Bit_score: 138
  • Evalue 1.50e-30

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

AR17 → Woesearchaeaota → DPANN → Archaea

Sequences

DNA sequence
Length: 531
ATGGCTCTTGTCTCTTATTATCCAGATGTATTTACTAATATTGTAGCAGGGATTCTTGTTATAGGATTTGGAATTCTTGTAGGGAATATCTTTTCAGTTATTGCAAAAAAAGTTTTACAAAGCTTTGAAATTGAGAGGATCCTTCAAGAAATAGGTGTGCGTTTTCCCTTAGAGAGCTTTGTGAGCTCTTTGCTTAAATATGCCATTTACATTGGAGGATTGATCTTAGGTTTGGCATTTTTAGGTTTAGAAAAAATACTTTTATACATTGTACTCTTCATTATTTTAGGACTTCTCATTACATTTATTCTTCTCTCTCTTAAAGACTTTATTCCTAATTTTTTTGCAGGACTTATTATTTACATGAAAAGTAAACTTCGAACAGGAGATATTGTTGAAATTGACACTATTGAAGGAAAAGTTATTCACACAGATATGCTAGAGGCAAAAATTCGAACAACAGATGGAGATGTTGTTGTTATGCCTAACATTCTTATACTGCGCAGTACTATTATCAAAAAGAAAAAATAA
PROTEIN sequence
Length: 177
MALVSYYPDVFTNIVAGILVIGFGILVGNIFSVIAKKVLQSFEIERILQEIGVRFPLESFVSSLLKYAIYIGGLILGLAFLGLEKILLYIVLFIILGLLITFILLSLKDFIPNFFAGLIIYMKSKLRTGDIVEIDTIEGKVIHTDMLEAKIRTTDGDVVVMPNILILRSTIIKKKK*