ggKbase home page

rifcsplowo2_01_scaffold_391_42

Organism: RIFCSPLOWO2_01_FULL_Archaea_Woesearchaeota_46_24

near complete RP 40 / 55 MC: 6 BSCG 8 / 51 ASCG 36 / 38 MC: 1
Location: 42111..42398

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit {ECO:0000256|PIRNR:PIRNR005586}; EC=2.7.7.6 {ECO:0000256|PIRNR:PIRNR005586};; TaxID=523849 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococca similarity UNIPROT
DB: UniProtKB
  • Identity: 48.0
  • Coverage: 98.0
  • Bit_score: 100
  • Evalue 1.20e-18
DNA-directed RNA polymerase subunit n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZPL5_THELI similarity UNIREF
DB: UNIREF100
  • Identity: 48.0
  • Coverage: 98.0
  • Bit_score: 100
  • Evalue 8.60e-19
DNA-directed RNA polymerase subunit M similarity KEGG
DB: KEGG
  • Identity: 48.0
  • Coverage: 98.0
  • Bit_score: 100
  • Evalue 2.40e-19

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thermococcus litoralis → Thermococcus → Thermococcales → Thermococci → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 288
ATGCTGCCAAGCAAGTCAAAGAAGGGACTGGCCTGCGCTTCATGCGGCCATTCTGACAAGAACTCAGAGACAAATGTCAGGATCAGCGAAAAAGGCAACCACAGCAAGGCAATTGAGGTAATTGAAAAAAGCGAGACAGAAATGCTGCCAAAAATTCGCGCGACCTGCAATAAATGCAAAAACGAAGAGGCTTTTTACTGGCATGTTCAAACAAGGGCTGCAGACGAGCCTGAAACCAGGTTTAACAGGTGCACAAAATGCGGCCATACCTGGAGGAGCTATGGTTGA
PROTEIN sequence
Length: 96
MLPSKSKKGLACASCGHSDKNSETNVRISEKGNHSKAIEVIEKSETEMLPKIRATCNKCKNEEAFYWHVQTRAADEPETRFNRCTKCGHTWRSYG*