ggKbase home page

rifcsplowo2_01_scaffold_600_22

Organism: RIFCSPLOWO2_01_FULL_Archaea_Pacearchaeota_32_35

partial RP 34 / 55 MC: 4 BSCG 22 / 51 ASCG 30 / 38 MC: 1
Location: 19117..22599

Top 3 Functional Annotations

Value Algorithm Source
rpoA1; DNA-directed RNA polymerase subunit A' (EC:2.7.7.6); K03041 DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] Tax=RBG_13_Pacearchaeota_33_26_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 77.2
  • Coverage: 999.99
  • Bit_score: 1831
  • Evalue 0.0
DNA-directed RNA polymerase subunit A' (EC:2.7.7.6); K03041 DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] id=5044121 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c similarity UNIREF
DB: UNIREF100
  • Identity: 52.6
  • Coverage: 844.0
  • Bit_score: 903
  • Evalue 2.30e-259
DNA-directed RNA polymerase similarity KEGG
DB: KEGG
  • Identity: 54.5
  • Coverage: 818.0
  • Bit_score: 901
  • Evalue 2.50e-259

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_13_Pacearchaeota_33_26_curated → Pacearchaeota → DPANN → Archaea

Sequences

DNA sequence
Length: 3483
ATGAAACTAGTAAGAAAAAGAATAGCAGAATTGAAATTTAGCTTGTTTAGCCCAGAGCAAATTAAGAAAATTTCTGCGGCAAAAATTGTAACTCCTGAACTTTATGATATTGATGGTTATCCTGTGGATGGAGGATTAATGGATCTTAGATTGGGAGCTATTGACCCCGGGGTAAGATGTAGGACATGCGGAGGAAGGTTAAAAGAATGCTTAGGGCATCCTGGAAGCATTGATTTAGCAAGGCCTGTGATGCACTTGAAGTATATTCCATTAATTGAATTATCTTTAAGATGTTTTTGCCATGAGTGTGGAAAGTTTTTGTTAAGCGATGAGAATGTAAAAAAATACGGAGCAACAGAAAGAGCAAAAAAAGCCAAGGATATTAAAAAATGTCTGCATTGCAACGCCAATCACGAAAAAGTCAAACTTGACAAACCAACAAGCTTTTTTATTGGCAAGAAAAGAATTTTTCCTACAGAAATAAGAGAAATTTTGGTTAAGATACCAAATGAAGAACTGAGAAAAATTGGTGTTAATACCACCACCTGCAGACCAGAATGGGCAATCCTAACTTCATTGCTTGTTCCTCCAGTAACAGTAAGACCAAGCATTATTCTTGAAACAGGAGAAAGGTCAGAAGATGATTTAACTCACAAACTTTCTGATATTATAAGAGCAAACCAGAGACTTTGGGAAAACTTGAATGCTGGAGCACCAGAAGTGATTATAGAAGATTTATGGGACTTACTGCAGTTTCATGTTACAACTTTTTTTGACAATACTGTCGCAAGAATCCCCCCTGCAAGACATAGGAGCGGGCAACCATTAAAAACAATAACAGAAAGAATTAAGGGCAAAGAAGGAAGAATAAGAAAAAATCTTGCTGGAAAAAGAGTAAATTATTCTGGAAGAACAGTGGTTTCTCCTGACCCATACATGGATATTAATGAAGTTGGAGTGCCATACGAAATCGCTAAAACAATCACTGCAGCTGAAACAGTTACTGATTTGAATATTGAAAAACTTAAAAAATTAATTTTGTCTGATGAATACCCAAGTGCAAACTACATTGTCAGACCAGATGGAAAAAGAAAAAAAATAACTTCTGATTTAAAGGATGAAATAATTAATGAACTTATGCCTGGATACAAAGTTGAAAGGCATTTACAAAATGGGGATCTTGTCTTATTTAACAGGCACCCAAGCCTTCACAGGGGCAGTTTAATGGCACACTATGTGAAAGTGCTTCCAGGAAAGACATTCAGGCTACACCCTGCTGCAACTTTTCCATACAACGCAGATTACGACGGTGATGAAATGAATATCCATTCCCCCCAAACAGAAGAGGCTTTAGCTGAAGCAAAAATACTGCTTGATGTGAAAAAGAATTTAATTTCGCCAAAGAATAACACAAACTGGCTTGGATGCAAATCAGATGCAATAACTGGGAATTATTTATTGAGCATTGGAGAATTCTCAAAAGAATACGCTGAGCAAATTTTATACAGGGCTGGAATTGAAAAGCATTTTAACAAAAAAACAGTCTCTGGGTTAGAGATTTTCTCCGGAATAATTCCTAAAATCAATTTTTCAAACAGCAGTATTAGTATTAAAGACGGCGAGATTACTAGCGGAGTGATAGATAAAACAACATTTGCTGAAGAAGATGGTGAATTAATCAAAGAACTAGACAAAAAATTTGGAGTAAATGAAACTGTTGAAACAATCCAAAAAATTTTCAGACTTGGAACTGTACACTTAACAGGAAGAGGAATAACTATCTCTGTTGAAGATTTGGATTTGGAGCAGGATGTTATTAATTCAGCTGATGAAATAATCAAAAAGGCTGAAGAACGGGCGCAGGAAATAGTGCATGCATATAATGATGGAACACTAGAAATTATACCAGGAAAAACAAATGAAGAATCAAGGGAAATTAAGATGCTTCAGGTTTTAAATAAAGTCAGGACAGACATCGGAAAAATAGTCCAGGAAAAATTTCCAAAGAATAATCCAGTAAGCTACATGATTAAATCAGGAGGGGGAGGAAATATCCTTAATATTACGCAAATGGCTTGCTGTGTTGGACAACAGGCATTATGGGGCAGAAGAATTGACTTAGGTTATAATGAAAGAACCCTATCATTTTTTAAGAAAGGAGATTTAACTCCAAAAGCACACGGGTTTATTAAAAGCTCGTTTATAAAAGGATTAAGACCAGATGAATTTTTCTTTGGGGCAATAACAGGAAGAGATAGCCTTATGGACACTGCATTAAGAACGCCAAAATCAGGCTATTTATACAGAAGACTGGCAAATGCCCTTCAAGATTTAAGAGTAGAATATGACGGAACAATCAGGGACAGCAATAATAAAATTATAGAATTCAAATACGGCGATGATGGCATGGATGTTTCAAAATTGCACCTTAATGGAAAATTAGAACCCGGAGAAGCTATAGGGATTATTACTGCACAATCATTTGGAGAATCCTCCACGCAAATGGCTTTGGATGTTTTCCATTTTGCAGGTGTTCAAGAAATGCAGATTACCCAGGGATTGCCAAGGTTAATTGAAATTTTTGACGCCAAAAAAAAGCCATCGTCTCCAAAGATGGAAATTTATCTTGAACCAAGCTATAATAATGAAAAAGAGGCCAAAATTCTTGCTGAAAAAATAAAAGAGGCAACAGTAAAAGATATTGCTTCTGAAATCTCCCTGGATTTTTCAAATAAAAAAATTGAAATTAAGATTGATGAACATGCATTGAAATTAATACATACATCCATGAAAAAAGTTATAGAAAGACTTAATGATGCTGGCTACAAAGTAAGGGAAAAGTCAGATGGAATTAGCCTTAATGCCTCTGAATTTGATTTTAAGGATATGTACAAGCTTAAAGAAAAATTGAAAAGGGTGATTATTTCTGGGATAAAAGGCATAAAACAGATTTTAATCGTAAAGAGGGAAAGAGATTTTGTAATCATAACCCTTGGAACAAATATGAAAGATATTTTAGGGCTAAAAGAAGTTAATAAAAACAAAACAATCTCAAATGATTTATACGAGATAGTTGAAGTTTTAGGAATAGAGGCTGGGCGGCAGATAATCATAAATGAGATACAAAATGTTCTTCAAACTCAGGGGCTTGATATTGATATAAGGCATTTAAAGCTTGTAGCAGATGCTATGTCTAACACTGGGGAGATTAAGGGAGTTACAAGGATGGGAATAGTCAGCCAAAAATCTTCGGTTTTGGCAAGGGCAAGTTTTGAAACTCCTGATAAACAATTTGTTAATTCTACAATTAAAGGCATAAGGGACAAATTAAGCAGCGTGATTGAAAATATTATTTTAAATCAGCCAGTTCCGATTGGTACGGGCTTGCCTGGATTGCTTGTAAAGGTTATAGGTCCACTTAAAAAAGCAGAGAGTGAATTAAAGACAGCCACCCAAAAAGTCGTTGAAAAAGCAAATAGATAA
PROTEIN sequence
Length: 1161
MKLVRKRIAELKFSLFSPEQIKKISAAKIVTPELYDIDGYPVDGGLMDLRLGAIDPGVRCRTCGGRLKECLGHPGSIDLARPVMHLKYIPLIELSLRCFCHECGKFLLSDENVKKYGATERAKKAKDIKKCLHCNANHEKVKLDKPTSFFIGKKRIFPTEIREILVKIPNEELRKIGVNTTTCRPEWAILTSLLVPPVTVRPSIILETGERSEDDLTHKLSDIIRANQRLWENLNAGAPEVIIEDLWDLLQFHVTTFFDNTVARIPPARHRSGQPLKTITERIKGKEGRIRKNLAGKRVNYSGRTVVSPDPYMDINEVGVPYEIAKTITAAETVTDLNIEKLKKLILSDEYPSANYIVRPDGKRKKITSDLKDEIINELMPGYKVERHLQNGDLVLFNRHPSLHRGSLMAHYVKVLPGKTFRLHPAATFPYNADYDGDEMNIHSPQTEEALAEAKILLDVKKNLISPKNNTNWLGCKSDAITGNYLLSIGEFSKEYAEQILYRAGIEKHFNKKTVSGLEIFSGIIPKINFSNSSISIKDGEITSGVIDKTTFAEEDGELIKELDKKFGVNETVETIQKIFRLGTVHLTGRGITISVEDLDLEQDVINSADEIIKKAEERAQEIVHAYNDGTLEIIPGKTNEESREIKMLQVLNKVRTDIGKIVQEKFPKNNPVSYMIKSGGGGNILNITQMACCVGQQALWGRRIDLGYNERTLSFFKKGDLTPKAHGFIKSSFIKGLRPDEFFFGAITGRDSLMDTALRTPKSGYLYRRLANALQDLRVEYDGTIRDSNNKIIEFKYGDDGMDVSKLHLNGKLEPGEAIGIITAQSFGESSTQMALDVFHFAGVQEMQITQGLPRLIEIFDAKKKPSSPKMEIYLEPSYNNEKEAKILAEKIKEATVKDIASEISLDFSNKKIEIKIDEHALKLIHTSMKKVIERLNDAGYKVREKSDGISLNASEFDFKDMYKLKEKLKRVIISGIKGIKQILIVKRERDFVIITLGTNMKDILGLKEVNKNKTISNDLYEIVEVLGIEAGRQIIINEIQNVLQTQGLDIDIRHLKLVADAMSNTGEIKGVTRMGIVSQKSSVLARASFETPDKQFVNSTIKGIRDKLSSVIENIILNQPVPIGTGLPGLLVKVIGPLKKAESELKTATQKVVEKANR*