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rifcsplowo2_01_scaffold_2769_7

Organism: RIFCSPLOWO2_01_FULL_Archaea_35_10b

near complete RP 34 / 55 MC: 4 BSCG 9 / 51 ASCG 32 / 38 MC: 1
Location: 6092..6688

Top 3 Functional Annotations

Value Algorithm Source
ribosomal RNA-processing protein rrp4 (EC:3.1.13.-); K03679 exosome complex component RRP4 Tax=CG_Micra_05 similarity UNIPROT
DB: UniProtKB
  • Identity: 35.9
  • Coverage: 198.0
  • Bit_score: 133
  • Evalue 2.70e-28
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003632410 similarity UNIREF
DB: UNIREF100
  • Identity: 33.6
  • Coverage: 217.0
  • Bit_score: 121
  • Evalue 7.50e-25
exosome complex RNA-binding protein Rrp4 similarity KEGG
DB: KEGG
  • Identity: 33.7
  • Coverage: 202.0
  • Bit_score: 119
  • Evalue 8.00e-25

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Taxonomy

CG_Micra_05 → Micraarchaeota → Archaea

Sequences

DNA sequence
Length: 597
ATGAAAAAGATTGTAATACCGGGGGATATAATAACAAGTACAGAAATGAATATTCCAAATACCTATAATGAGAATGGAGTTACATATGCCACAACTATCGGAATGGTGGATGAGACAGGAAGATATGTACCGCTTAGAACAATATACGCTCCAAGATCAGAGGATATAGTTATTGGTATTGTTGTTGGAGTTAGATCAGCAGGTTATTCTGTTGATTTGGGAATATCAAATTATGGTTTTATACCGTCAAGATTCTTGAAAAGAAAACTTTCTTTAGGAGATTTTGTTGTTGCAAACATTAGAACAATTGCGGACAATGGTGATATTGATCTTGGCGATGTAAGAAAATTACCAGATGGAAAAATGGTAGAATTCCCAACTGCAAAAATCGCGAGATTGATTGGAAGACAAAGCAGTATGCTAAATTTGATAAAAGAAGCAATTGGCGGGGATGTAGTTGTAGGCAATAACGGATATATTTGGGTTAGCGAAGAAAGCAATATACCATTGTTTATGAAAGCAGTTGATTTGGTTATAGAAAGGGCGCATACTTCTGGATTAACGGATCAAATTTCGGAATTACTTAAAAAAAGGTGA
PROTEIN sequence
Length: 199
MKKIVIPGDIITSTEMNIPNTYNENGVTYATTIGMVDETGRYVPLRTIYAPRSEDIVIGIVVGVRSAGYSVDLGISNYGFIPSRFLKRKLSLGDFVVANIRTIADNGDIDLGDVRKLPDGKMVEFPTAKIARLIGRQSSMLNLIKEAIGGDVVVGNNGYIWVSEESNIPLFMKAVDLVIERAHTSGLTDQISELLKKR*