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rifcsplowo2_01_scaffold_2769_9

Organism: RIFCSPLOWO2_01_FULL_Archaea_35_10b

near complete RP 34 / 55 MC: 4 BSCG 9 / 51 ASCG 32 / 38 MC: 1
Location: 7439..8224

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein n=1 Tax=Thermococcus zilligii RepID=UPI00029AF63D similarity UNIREF
DB: UNIREF100
  • Identity: 45.4
  • Coverage: 260.0
  • Bit_score: 216
  • Evalue 3.00e-53
rrp42; exosome complex RNA-binding protein Rrp42 Tax=CG_Micra_04 similarity UNIPROT
DB: UniProtKB
  • Identity: 47.1
  • Coverage: 257.0
  • Bit_score: 227
  • Evalue 1.80e-56
ribosomal RNA-processing protein RRP42 similarity KEGG
DB: KEGG
  • Identity: 45.0
  • Coverage: 260.0
  • Bit_score: 215
  • Evalue 2.40e-53

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Taxonomy

CG_Micra_04 → Micraarchaeota → Archaea

Sequences

DNA sequence
Length: 786
ATGGATGAATTAACAGAATTAATATTAACTGAAAATAGAAGGAAGACGATTATCTCCAGTTTAGAAAAAGGAGTAAGACTTGATGGTAGAAAAGCTGATGAAGTAAGGGAAATAAAAATAAAAACAGATGTAATGCCACATGCAGAAGGTTCTGCCTTAGTAGAATTGGGAGATACCAAAGTACTGGCCACATATAAGATTACAATAGACAAACCTTTCCCTGATCGACTAAATGAGGGGATATTTATGTTTAACTCTGAATTTGTCCCACTTGCACATCCAAGTTTTGAATCAGGGCCACCTAACGAAGAATCAATTGAATTATCAAGAGTTGTTGATAGAGGAATCAGAAGTGCCGAATGTATTGATGTAGAATCTCTCTTTATTGAGGAGGGGAAGGTACTAGCTGTGTTTGGGGACTTATGGGTTTTGGATCATAATGGGAATTTGTTTGATTGTGCTTCTATTGCAGCGATAAGTGCGCTTATTAACACTAAAATTCCAGAAATAAAAGATGGCGAATTAGTAAGAGACGGCAAAGGGAAAAATATCGAGCCAAAGGTGCTTCCAGTATCTGTTTCATTTGTTAAAATAGGAAAATATTGGCTAATTGACCCAAGCTATGAAGAGGAATTAAGCGCAGATGCTTGCATAACCATTACAACAACTGAAGATCACATTTGTTCAATACAAATGAGATGGGGAGCATTGAGCAAAGAAGAACTGATGGTTTTGATTGATATATCCTTCAAAACAGGAAATGATATAAGAAGACTTCTTTACTAA
PROTEIN sequence
Length: 262
MDELTELILTENRRKTIISSLEKGVRLDGRKADEVREIKIKTDVMPHAEGSALVELGDTKVLATYKITIDKPFPDRLNEGIFMFNSEFVPLAHPSFESGPPNEESIELSRVVDRGIRSAECIDVESLFIEEGKVLAVFGDLWVLDHNGNLFDCASIAAISALINTKIPEIKDGELVRDGKGKNIEPKVLPVSVSFVKIGKYWLIDPSYEEELSADACITITTTEDHICSIQMRWGALSKEELMVLIDISFKTGNDIRRLLY*