ggKbase home page

rifcsplowo2_01_scaffold_4706_18

Organism: RIFCSPLOWO2_01_FULL_Archaea_Woesearchaeota_41_36

near complete RP 34 / 55 MC: 5 BSCG 6 / 51 ASCG 33 / 38 MC: 3
Location: comp(15228..15923)

Top 3 Functional Annotations

Value Algorithm Source
sigma-54-interacting response regulator Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 43.9
  • Coverage: 214.0
  • Bit_score: 172
  • Evalue 7.90e-40
Helix-turn-helix, Fis-type id=5043985 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18 similarity UNIREF
DB: UNIREF100
  • Identity: 47.6
  • Coverage: 210.0
  • Bit_score: 171
  • Evalue 9.60e-40
two-component response regulator nitrogen regulation protein; K13599 two-component system, NtrC family, nitrogen regulation response regulator NtrX similarity KEGG
DB: KEGG
  • Identity: 30.9
  • Coverage: 110.0
  • Bit_score: 58
  • Evalue 2.90e-06

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_OD1_Giovannonibacteria_43_11c → Giovannonibacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 696
TTGTTTTGCTGGCGTTTTTCCATAATTCTTATAAATATTGCGACATTTTGGTCAGTTATGTCCTCGTATGATTTGGAGCGTGTCATCAAAGACAAAATTGAGCCTCTCATCGAAGAAGCAATGCAGAAGTTCTTGGGTGTAACGATTCGTGAGGTTGAACAAGACATCACTGAAAAAATAGGCGGAGAAAAAATCATCGGGTTGCAGGTACGCGTTGATTTGTCGTTTAAAGAAGCAAAAAAATTGTTCAAAAAAGAGTTTTTAGAACGAACATTAAAGACACATTACGGCAATGTCTCTGAAGTTGCGGACATCGTTGGACTGGATAGGAGAAGCATCCATCGCGATTTGCGTACACTCGGCATCGACATGAAACGCGTGCGCGAAAAACTCTATAAAGTAGGCTATTTCGAGAAAGAAGCGGTTGATGGTGTTATTAGAAAAGTACTCGAACAATACAAGCAAAGCATTCGTCCTGAACGCTTGGAGAAAATGTATGAGCATGTGCCTGAACTCAGTGAACACATTGTGCATTATCTGCCGTTGACGATGACATGGAAAGAGGCAGAGCGTGAATTTGAGCGGAAGTATCTCAAAGCTGCGCTTGAACGGAGCGGAACGGTTTCGAACACTGCACGGACGATTGGATTGCGATATGAGACACTTTTACGGAAGATGAAGAAGTTGGGGTTGTAA
PROTEIN sequence
Length: 232
LFCWRFSIILINIATFWSVMSSYDLERVIKDKIEPLIEEAMQKFLGVTIREVEQDITEKIGGEKIIGLQVRVDLSFKEAKKLFKKEFLERTLKTHYGNVSEVADIVGLDRRSIHRDLRTLGIDMKRVREKLYKVGYFEKEAVDGVIRKVLEQYKQSIRPERLEKMYEHVPELSEHIVHYLPLTMTWKEAEREFERKYLKAALERSGTVSNTARTIGLRYETLLRKMKKLGL*