ggKbase home page

rifcsplowo2_01_scaffold_5556_3

Organism: RIFCSPLOWO2_01_FULL_Archaea_Woesearchaeota_28_8

near complete RP 37 / 55 MC: 5 BSCG 7 / 51 ASCG 34 / 38 MC: 5
Location: comp(1757..3748)

Top 3 Functional Annotations

Value Algorithm Source
NHL repeat containing protein n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GI56_METPE similarity UNIREF
DB: UNIREF100
  • Identity: 26.8
  • Coverage: 452.0
  • Bit_score: 118
  • Evalue 2.10e-23
cell surface protein similarity KEGG
DB: KEGG
  • Identity: 30.3
  • Coverage: 396.0
  • Bit_score: 122
  • Evalue 4.20e-25
Cell surface protein {ECO:0000313|EMBL:AKB43006.1}; TaxID=1434123 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina vacu similarity UNIPROT
DB: UniProtKB
  • Identity: 30.3
  • Coverage: 396.0
  • Bit_score: 122
  • Evalue 2.10e-24

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methanosarcina vacuolata → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1992
ATGAAAATTAGGGTGACTATCTTTATATTCGTGCTTTTGTTATCTATATTAAATGTTTATTCTACGGCGACTTTATCTGGAACTACAAATTGTCCTGCATTTATACAAGATACTAATTTTGGAACTGGCGGTGTTTTGACCGTTAATTCTCCTTATGGTATAACTCAAGATCCAAGAAAAGATTTAATCGTATTATCTGCTTTTGATAGTGAAGTTAATGTTTTTGACCTTACTGGGAAATTTTTAAGAACATATGGTTCTTATGGCTCATCTCCTGGTCAGTTTAATATTCCTATGGGTATTTCCAATCATATTAATGGAATATATTATATTGCGGATACTTTTAATAAAAGAGTTGTTCAAGTCAATTCTGAAACAGATGAACTAGAAACTGTACGTCTCAATACTGAATTAGGTTATTCTCGTTTTACTGATGTTGTGCAAGATTCTACTGGCAGATTATATATTGCAGATTTAGATAATAAAAGAATATTAGTAAAAGACAACATAAGGGATAATTCTGAATCTGGTACAAGAATATTTGCTACTTTAGCAAGCGTCAATAATCCAGGTATGTTATATTCTCCACTTAATTTAGCTATTGATAGTTCTAATAATTTATATGTCTTGGGAGATTCAGGAGAGGGGCTTTCTGCAATTTTAAAATATGATCCTGATGGAAATATGATTTATGAAAAGATTTATGAAAAACAAGGTTTTTATGATCTAGTTCAGGGAGATACAGATCTTTTTGAGGATGATATAACTAGTGTTGCTTTAGACTCTGTCGAAAATATTTATGTTGCTGATGTTACTTATCAGGATGGAGTTATTGTTGGACATTCTGTAAGGAAATTCAATTCGAATTTTGATTATATTGGTGAATTTGATTCTGGTAATCTTGGGAAATTTGTTTACATAACTGAACTTTTTGTTGATCACCAAGATAGATTATATGTTGCTGATGCTGGAGATATACAAAGATTTTATTGTGCTGAAAGTAAAGATCAAGTTTACCAAAAACCTCAAGATCCCACTAAGGGCTTGCTTCTAGCTGATCCTACTCCTAATGTTGGTGGAAATTATGTTATTACAGGTAAAGTTTATGATTCTTCTAATAATAATATTGTTCATGAGGCTGATTTTGATTTTAGTGTTGAATTGCCGCCTGGAACTTATAAGGTTTTTTGGGCAATAACTTCAAATGGACAAACTTATACTCCGATTTCAAGTGTTGATAAAATACTTGTTGCCGGAGGAACTGCAACGGCAGTTGGTGATTTTTGCAGGACAATTTCTCCAGTGAAAGAAATAGTACTTGAGGATTGTAAGACTTATTATTGTAGTGATGGTATTAAAAATTGGGATGAAATTGGTGTTGATTGTGGCGGAGGTTGTGGTAATGCTTGTTCAACTCCTAACGAAGAAACTTGTGATGATGGAGTTATGAATCAGGATGAATCAGATGTTGACTGCGGTGGAGTTTGTGAACCTTGTGTTGAATGTTTTACAGACGATGATTGTGATGATGGAATGTGTTATGAAGGAAGTTGCATTGATGAAGAAGAATTTTATTATTATGATAGTTGTGAAACTCAAGGCGGCGTTGATTGGAGTGGAGCTACTTTAGAAGATTGTAATGGTGAATATACTTATGATTTAGATAAACCTTGTTGTGTTGGACAAGATGTTGCATTACTTGAAGCAAATTTTGGTGCTGGTGAGGTTTATTTTTTAAGCAGAGGTCCTTGTTTAGATGATGATAAAGATGGCTTGGGAACTTCTGAAATTAAAGTTTGTGATGCAAATTCTGCTAGTAGTTGTACTTTAGTTGGTGATACCAGATTACAAGAGTTAGGATTTACTGAAAATACTTTTGATGAAGACTGTACTGTATTACCACAAGGAGTAAATCCTGTTCCTTTCTTTAATTTAACTAGCTTGTTGTTAAGCTTGGGATTAATATTAATTTATTATAGAAAGAAATTTTAA
PROTEIN sequence
Length: 664
MKIRVTIFIFVLLLSILNVYSTATLSGTTNCPAFIQDTNFGTGGVLTVNSPYGITQDPRKDLIVLSAFDSEVNVFDLTGKFLRTYGSYGSSPGQFNIPMGISNHINGIYYIADTFNKRVVQVNSETDELETVRLNTELGYSRFTDVVQDSTGRLYIADLDNKRILVKDNIRDNSESGTRIFATLASVNNPGMLYSPLNLAIDSSNNLYVLGDSGEGLSAILKYDPDGNMIYEKIYEKQGFYDLVQGDTDLFEDDITSVALDSVENIYVADVTYQDGVIVGHSVRKFNSNFDYIGEFDSGNLGKFVYITELFVDHQDRLYVADAGDIQRFYCAESKDQVYQKPQDPTKGLLLADPTPNVGGNYVITGKVYDSSNNNIVHEADFDFSVELPPGTYKVFWAITSNGQTYTPISSVDKILVAGGTATAVGDFCRTISPVKEIVLEDCKTYYCSDGIKNWDEIGVDCGGGCGNACSTPNEETCDDGVMNQDESDVDCGGVCEPCVECFTDDDCDDGMCYEGSCIDEEEFYYYDSCETQGGVDWSGATLEDCNGEYTYDLDKPCCVGQDVALLEANFGAGEVYFLSRGPCLDDDKDGLGTSEIKVCDANSASSCTLVGDTRLQELGFTENTFDEDCTVLPQGVNPVPFFNLTSLLLSLGLILIYYRKKF*