ggKbase home page

rifcsplowo2_01_scaffold_8218_11

Organism: RIFCSPLOWO2_01_FULL_Archaea_Woesearchaeota_28_8

near complete RP 37 / 55 MC: 5 BSCG 7 / 51 ASCG 34 / 38 MC: 5
Location: comp(10775..11461)

Top 3 Functional Annotations

Value Algorithm Source
Polysaccharide deacetylase n=7 Tax=Clostridium thermocellum RepID=A3DGP3_CLOTH similarity UNIREF
DB: UNIREF100
  • Identity: 38.7
  • Coverage: 238.0
  • Bit_score: 150
  • Evalue 1.70e-33
polysaccharide deacetylase similarity KEGG
DB: KEGG
  • Identity: 38.7
  • Coverage: 238.0
  • Bit_score: 150
  • Evalue 4.90e-34
Polysaccharide deacetylase {ECO:0000313|EMBL:ABN53122.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum similarity UNIPROT
DB: UniProtKB
  • Identity: 38.7
  • Coverage: 238.0
  • Bit_score: 150
  • Evalue 2.40e-33

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ruminiclostridium thermocellum → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 687
ATGACAAAAACAATATACTTAATGTTAAATGATACTCCTTCATCTTATTCCAAAGAAAGATTAGATTATTTAATAGCTAATAAAATTCCTGCAATCTTATTCTGTAAGGGAAATAATATGGAAGAACGTCCAGAAATTGTAGCAGAGTCTATTAGAAATGGTTTTATAATTGGAAATCATTCATACACTCATCCGCATTTTTCACAATTAGAATTAATTCAATGTGAAGAAGAGATATCTAAAGCAGATAGAATTATAGAAGAAGCATATTATCAAGTAAGTATTAAAAGACCAGAAAAATTATTTATGTTCCCATTTTTTGATAATGGAACAGCAAGAAGCGTATTACACAAAAAAAGATTACAGGATGTTTTAAAAAATCAAGATTATAAAAACCTAGACACAAGCAGAATTACATATCCATTCTTTAAGGAGGAAGGTTTGCATTTAAGTAACGATGTTTATTGTACTTTAAATTTCCAGGAATGGAAAAATCCAAATCTAGATGATTTATTGAAAAAAATAGATTCTCCAGATAATTTATTTGGAGGAGATTTATCAGATTACACTTCAGCGGATTTATTATTAATGCATGATAACGAAAAAACTAATCCATCGTTATTTCCAGCAATCATAGATAAATTAGTTGCAAGAGGCGATATAAGTTTTGAATTGCCAAATTTTTAA
PROTEIN sequence
Length: 229
MTKTIYLMLNDTPSSYSKERLDYLIANKIPAILFCKGNNMEERPEIVAESIRNGFIIGNHSYTHPHFSQLELIQCEEEISKADRIIEEAYYQVSIKRPEKLFMFPFFDNGTARSVLHKKRLQDVLKNQDYKNLDTSRITYPFFKEEGLHLSNDVYCTLNFQEWKNPNLDDLLKKIDSPDNLFGGDLSDYTSADLLLMHDNEKTNPSLFPAIIDKLVARGDISFELPNF*