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rifcsplowo2_01_scaffold_23670_11

Organism: RIFCSPLOWO2_01_FULL_Archaea_Woesearchaeota_28_8

near complete RP 37 / 55 MC: 5 BSCG 7 / 51 ASCG 34 / 38 MC: 5
Location: 5945..6721

Top 3 Functional Annotations

Value Algorithm Source
rrp42p; exosome complex RNA-binding protein Rrp42 (EC:3.1.13.-); K12589 exosome complex component RRP42 id=5045737 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c similarity UNIREF
DB: UNIREF100
  • Identity: 61.2
  • Coverage: 258.0
  • Bit_score: 337
  • Evalue 1.50e-89
Exosome complex RNA-binding protein Rrp42, exosome complex component RRP42 {ECO:0000313|EMBL:KHO54404.1}; EC=3.1.13.- {ECO:0000313|EMBL:KHO54404.1};; TaxID=1579376 species="Archaea.;" source="archaeon similarity UNIPROT
DB: UniProtKB
  • Identity: 61.2
  • Coverage: 258.0
  • Bit_score: 337
  • Evalue 2.10e-89
Ribosomal RNA-processing protein RRP42 similarity KEGG
DB: KEGG
  • Identity: 53.9
  • Coverage: 258.0
  • Bit_score: 283
  • Evalue 7.20e-74

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Taxonomy

archaeon GW2011_AR18 → Archaea

Sequences

DNA sequence
Length: 777
ATGAGCAACATATTGAAAGAGCATATACTTACAGTACTTAAACAAAATTTAAGAACTGATGGAAGAAAATTTGATGAATTTAGAAAAGTTGAAGTTGAATATGGAATAAGTAACTCAGCAGAAGGAAGTGCCAGAGTTAAAATTGGAGATACTGAAGTTATTGCAGGTGTTAAAGTAGAAGTTGGTACACCATTTCCAGATAATTCTGATGAAGGATCAATTATGGTTAATGTTGAACTTAGACCTTTTTCAAGTCCAGATTTTGTTAGTGGACCACCAGGAACAGATGCTATAGAATTAGCTAGAGTTGTTGATAGAGCAATTAGAGAAGCAAATGCATTAGATTTTAAAAAATTATGTATAAAAGAAGGAGAATCTGTTTGGATGGTTTTAATTGATATTTATCCAATAAATAATTGTGGAAACTTATTCGATGCTTCTGCACTATGTGCTTTGGCTGCATTACAAGATGCAAAGTTCCCTAAATTAGATGAGAATAATAAAATAGATTATAAACAAAAAACTGACAAGAAAATACCTTTGGCAAATCAGCCTTTATCGTGCACAGTTTCTAAAATTGGCGAAAATTTGTTAGTTGATTTAGATGAAGTTGAAGAAAAATTCATTGATGCAAGATTAACAATTGGTGTTTTGGAAGATGGAACTTTATGTGCTTTACAGAAAGGCGGCGATACTGCGCTTGATGTGAAGGATATTGAAAAGATGGTGGATTTAGCTATCAAAAAAACAAAAGAATTGAGGAAGGCATTGAAATGA
PROTEIN sequence
Length: 259
MSNILKEHILTVLKQNLRTDGRKFDEFRKVEVEYGISNSAEGSARVKIGDTEVIAGVKVEVGTPFPDNSDEGSIMVNVELRPFSSPDFVSGPPGTDAIELARVVDRAIREANALDFKKLCIKEGESVWMVLIDIYPINNCGNLFDASALCALAALQDAKFPKLDENNKIDYKQKTDKKIPLANQPLSCTVSKIGENLLVDLDEVEEKFIDARLTIGVLEDGTLCALQKGGDTALDVKDIEKMVDLAIKKTKELRKALK*