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RIFCSPLOWO2_01_FULL_KAZAN_48_13_rifcsplowo2_01_scaffold_3506_13

Organism: candidate division Kazan bacterium RIFCSPLOWO2_01_FULL_48_13

near complete RP 51 / 55 MC: 2 BSCG 49 / 51 MC: 1 ASCG 12 / 38
Location: comp(16545..17084)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-subfamily sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_01_FULL_KAZAN_48_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 179.0
  • Bit_score: 356
  • Evalue 2.30e-95
RNA polymerase ECF-type sigma factor id=2634164 bin=GWA1_Kazan_50_15 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWA1_Kazan_50_15 organism_group=Kazan organism_desc=Probably Kazan: candidate for curation similarity UNIREF
DB: UNIREF100
  • Identity: 51.5
  • Coverage: 167.0
  • Bit_score: 190
  • Evalue 2.00e-45
ECF sigma factor similarity KEGG
DB: KEGG
  • Identity: 36.6
  • Coverage: 186.0
  • Bit_score: 120
  • Evalue 4.30e-25

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Taxonomy

R_KAZAN_48_13 → Kazan → Bacteria

Sequences

DNA sequence
Length: 540
ATGCTTATTCCTCCTGCACGAATTGAAACACCCAGGGAACTGATAGACCAAGCGCGTAAAGGTGACGCTAAGGCTTTCGGCACGATTTATGAGCTTTGGGTCGATAATATTTATCGCTTTGTCTATCTTAAAACTAAAGACGAGGATGTGGCCGAAGATCTGACCGCTGAAGTTTTCCTCAAAGCTTGGAAGGGTCTAAAGACCTACCAGCCTCGCGCCGAAGTTAAGTTCTCTACTTGGCTCTTTGCTATCGCCAGAAACGCAGTGGTCGACTACTATCGCACTACGCGGCAAAGTCTGTCATTCGAGAATCTGCCAGAGATTGCCGATCTAAACGAGGTTGATCTCTATCCCGAACAGACAAACTTAAAAGAAGCGCTATCGCGGATCAAGCCGGAGTATCAGCAAGTACTGACACTTCGTTATCTCGATGATGTGCCGATTCCTAAAACTTCACAAATTATGAAGAAGAAGGAAGGCAACATCCGGGCGCTAACTAACCGCGCGTTGGCTGCGCTTAAAAAGGAGCTAAAATCTTAG
PROTEIN sequence
Length: 180
MLIPPARIETPRELIDQARKGDAKAFGTIYELWVDNIYRFVYLKTKDEDVAEDLTAEVFLKAWKGLKTYQPRAEVKFSTWLFAIARNAVVDYYRTTRQSLSFENLPEIADLNEVDLYPEQTNLKEALSRIKPEYQQVLTLRYLDDVPIPKTSQIMKKKEGNIRALTNRALAALKKELKS*