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RIFCSPLOWO2_01_FULL_KAZAN_48_13_rifcsplowo2_01_scaffold_3506_16

Organism: candidate division Kazan bacterium RIFCSPLOWO2_01_FULL_48_13

near complete RP 51 / 55 MC: 2 BSCG 49 / 51 MC: 1 ASCG 12 / 38
Location: comp(19395..19952)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma factor Tax=RIFCSPLOWO2_01_FULL_KAZAN_48_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 185.0
  • Bit_score: 368
  • Evalue 7.90e-99
RNA polymerase sigma factor SigW id=2634170 bin=GWA1_Kazan_50_15 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWA1_Kazan_50_15 organism_group=Kazan organism_desc=Probably Kazan: candidate for curation similarity UNIREF
DB: UNIREF100
  • Identity: 40.2
  • Coverage: 179.0
  • Bit_score: 128
  • Evalue 9.80e-27
ECF subfamily RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 33.1
  • Coverage: 178.0
  • Bit_score: 108
  • Evalue 1.70e-21

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Taxonomy

R_KAZAN_48_13 → Kazan → Bacteria

Sequences

DNA sequence
Length: 558
ATGACCGAAAAAGAGATACAAACCCTAATTAGCCGGATTCAATCAGGCGAGACCGAGCTGTTTGGCCAGCTTTTTGAGCTATTCTCGGACAAGATATTCTGCCACGTAACCTTTCGGGTAGGAGATCGAGAGACAGCCAAAGATCTTACCTCCGAGGTGTTTTTAGGGGCCTGGCAGAGTTTACCTAAGTACCATCATCAAGAGACCGCCAAATTTTCAACCTGGTTGTTCTCGATCGCCCGGAGGGTGATAGCTGATTACTACCGCAAATATCAGCGGACTGATCGGGGGAAGGTGGCGTTGGACGATATTGCCGAATTTCTGCCTGATAAGGGCCTTTCGCCAGAGGAGTTAGCAGCCACTAAGCTGATATCTGACCGGGTTGTGGCAGCCATTCAGTCGCTTCCACCAGATATGGCGGAGGCTGTAACACTTCACTACATTGATGAGATGGAGCATGCGGAGATGGCCACTATTACCGGTAAAACCGAAGGAAATCTTAGGGTGTTGGTCCATCGTGGGCTAAGTCAGATTAGAAAAATCCTATTGTCACATTAA
PROTEIN sequence
Length: 186
MTEKEIQTLISRIQSGETELFGQLFELFSDKIFCHVTFRVGDRETAKDLTSEVFLGAWQSLPKYHHQETAKFSTWLFSIARRVIADYYRKYQRTDRGKVALDDIAEFLPDKGLSPEELAATKLISDRVVAAIQSLPPDMAEAVTLHYIDEMEHAEMATITGKTEGNLRVLVHRGLSQIRKILLSH*