ggKbase home page

RIFCSPLOWO2_01_FULL_OD1_43_160_rifcsplowo2_01_scaffold_11987_2

Organism: Candidatus Giovannonibacteria bacterium RIFCSPLOWO2_01_FULL_43_160

near complete RP 43 / 55 MC: 1 BSCG 45 / 51 ASCG 9 / 38
Location: comp(184..1407)

Top 3 Functional Annotations

Value Algorithm Source
General secretion pathway protein F {ECO:0000313|EMBL:KKS95310.1}; TaxID=1618651 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_43_13.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 407.0
  • Bit_score: 772
  • Evalue 2.30e-220
type IV pilin; K02653 type IV pilus assembly protein PilC id=5227297 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria) similarity UNIREF
DB: UNIREF100
  • Identity: 47.2
  • Coverage: 413.0
  • Bit_score: 390
  • Evalue 1.80e-105
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 34.3
  • Coverage: 405.0
  • Bit_score: 265
  • Evalue 1.90e-68

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_43_13 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1224
ATGCAATTTCGTTATAAAGCCAGGACAGGCGAAGGGGAAGGAACCGAGGGGGTGATTGACGCGGCCAATTTGGATTTGGCTGTCTCGTCGCTCCAGCGGCGCAATTTTTTAGTTATATCCATTGAACCTGTAGAAGGACCAGGCGGAGTGGAACGCGTTGGTAAAATCACAGAATGGCTCGGAATCTTTGAAAGCATTCCGATGGAGGACGTTGTAATTTTAACGCGCCAACTCTCCACCCTTTTTGAAGCGAAAGTGCCGGTGGTGGAATCATTAAAAATAATAACCGGAGAGACAGAAAACCGAAAATTGCGCCGCCATATTTCCGACCTTTTGGACGACATTCAGGGAGGTATGCCGATGTCTGGGGCTATGGCAAGGCACCCCGAAGTTTTTTCCAGATTTTACGTGGCGATGATAAAATCCGGCGAAGAATCCGGAAAATTGGAAGATATTTTTAAATTTTTGGCCGACTATCTGGAGCGTTCCTACGAACTTTCCAGAAAAGCCAGAAACGCCTTGATTTATCCGGCGTTCGTTTTATCCACTTTTATTATTGTAATGGCGATGATGCTTGTTTTTGTGGTGCCGAACCTTGCCAATATTTTATTAGAATCGGGGCAGGCCATACCGATTTATACGCGCGCCATTATTGGCTTCAGCGAATTTTTGAGAAGCTTCGGCATAATTCTTGTACTGCTTCTAGCAGTTTTAGCAGTGCTTTTGGCGCGATACGCCAAAACGGACAGCGGCCGGCTTTATTTTTCGCGGCTTGCCATATCCTTTCCGATTATCGGCGGACTTTATAAAAAAATATATCTTTCCAGAATTTCGGATAACCTGCACACACTGCTTTCGGGAGGCATCACGGTGGTACGGGCTCTGGAAATTACTTCAGAAGTTGTAGGCAACGAAGTTTACAGAAAAATCCTTCTGGATTCTATGAATTCCGTAAAAAGCGGCAGCATGATTTCGGAATCTTTGGCCAAATACGCGGATATTCCGCCATTGCTTTCGCAGATGATAAGAATTGGCGAAGAGACCGGTAAACTGGACTATATTTTAAAAAGCGTGGCTGGGTTTTACAGAAGAGACGTGGATAATTTTATAGACAATTTGGTGAGCTTGATTGAACCGATTTTAATAGTGGCGCTTGGTTTGGGAGTGGGGGCATTGGTGGCGGCGGTTTTAGTGCCTATTTATAACATCTCCGCCACTTTTTAA
PROTEIN sequence
Length: 408
MQFRYKARTGEGEGTEGVIDAANLDLAVSSLQRRNFLVISIEPVEGPGGVERVGKITEWLGIFESIPMEDVVILTRQLSTLFEAKVPVVESLKIITGETENRKLRRHISDLLDDIQGGMPMSGAMARHPEVFSRFYVAMIKSGEESGKLEDIFKFLADYLERSYELSRKARNALIYPAFVLSTFIIVMAMMLVFVVPNLANILLESGQAIPIYTRAIIGFSEFLRSFGIILVLLLAVLAVLLARYAKTDSGRLYFSRLAISFPIIGGLYKKIYLSRISDNLHTLLSGGITVVRALEITSEVVGNEVYRKILLDSMNSVKSGSMISESLAKYADIPPLLSQMIRIGEETGKLDYILKSVAGFYRRDVDNFIDNLVSLIEPILIVALGLGVGALVAAVLVPIYNISATF*