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RIFCSPLOWO2_01_FULL_OD1_43_160_rifcsplowo2_01_scaffold_11987_6

Organism: Candidatus Giovannonibacteria bacterium RIFCSPLOWO2_01_FULL_43_160

near complete RP 43 / 55 MC: 1 BSCG 45 / 51 ASCG 9 / 38
Location: comp(3405..5117)

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilus assembly protein PilB {ECO:0000313|EMBL:KKT62217.1}; TaxID=1618648 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA2_44_26.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 568.0
  • Bit_score: 1096
  • Evalue 0.0
general secretion pathway protein E id=5803081 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 53.9
  • Coverage: 573.0
  • Bit_score: 619
  • Evalue 2.50e-174
type IV pilus assembly protein PilB similarity KEGG
DB: KEGG
  • Identity: 43.9
  • Coverage: 563.0
  • Bit_score: 421
  • Evalue 3.70e-115

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Taxonomy

Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA2_44_26 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1713
ATGGCGATGAGAGGCGTTTTAGACATTTTGGCGGGTTCTGGAGATATTACGCTCCAGGAAGCCGCGGAGATAAGAAAATTGGCGCGGTCCAAAAATATTTCCATTGAGGAAGAGCTTTTGGAACGCGGTTTGGACGAGCAAAAAATTCTTAAAGCCAAAGGAGAGGCTTTTGGCATCCCCACGTTTTCTTTAGCGGGGAAGAAAGTGCCTTTTGATTTGCTTAAAAATATTCCTGAGGAATCAGCCAAGCATTATCAGTTTGTTCCGATTAATCTTGAAAACGGCATAATCTCTATCGGCATGGTGGACCCGGATAATATAGAAGCCAAAGAGGCGCTGAAATTTATCGCCACGCGGCTCAATCAGCCTTTTAAAATATTTTTAATCTCGCGCCGCGATATGGCCGCAGTTTTGGGAGAATATAAAGGCATTTCGGGAGAAGTGACAAAGGTTTTGGGCGAGCTGGAGGTGGCGCTTTCGGAGGAGTCAACACTGCCCAAAGAAATGATCAGAGAGGAAACGTCTTTTGTTGAAGACGCTCCCATTACCAAAATAGTGGCGGTAATTTTGCGGCACGCCACCGAAGGCCGGGCTTCGGATGTCCATATAGAGCCATCCGGGGACAAATTGCGCGTCCGGTTTCGCGTAGACGGCGTGCTTTACACCAGTCTTTTTTTACCGATGAAAGTGCACGATTCCATTATTTCGCGCATTAAAATTTTGACCAACATGCAGCTGGATGAAAAGAGAAAACCGCAAGACGGCCGGTTTTCCGCAAAAATCGAAGGCAGAGAAATTGATTTTCGCGTATCCACTTTCCCGACTTATTTTGGGGAAAAAGTGGCCATCCGCATCTTGGATCCAGAAACCGGCGTAAAAAATTTGGATGATGTGAATTTTTCTCCGGGCCACGCCAAAGCGGTAAAAGAAGCTCTCACTCGGGCTTATGGCTTGATATTGCTTACCGGCCCCACCGGCTCCGGCAAATCCACCACGCTTTACGCGATGCTGCAATCTTTAAATGAAGACCGCTGGAATATCGTGAGTCTGGAAGACCCGGTGGAATATTCCATCATAGGAATAAACCAGTCGCAGGTCAGGCCGGAGATAGGATATGATTTCGCGGAAGGCCTGCGGCATATTTTGCGCCAGGATCCGGATGTAATTATGGTGGGCGAGATCCGCGACAAAGAAACAGCCCAGCTGGCGATTCACGCCGCGCTCACTGGGCACTTGGTGTTTTCAACTTTGCACACCAATACCGCGGTCGGAGTCGTTCCAAGGCTTATTGATATGGGGGTGGATCCTTATCTTATCGCGCCAACTTTGATTATGGCCATCGGCCAGCGACTAGTGCGGACGCTCTGCGACGATTCCAAAGAGGAAGTGCTGGTGGAAGGAAAAATAAAAGAAGCAATTATGCAAGAAGTGAATACCATGCCCGAAAGCATCAAGCGAAACATAAAAATACCCAAAGTGATTTATAAACCGAAGATTTCCGGAACTTGCCCTAAGGGCTCTAGGGGGCGTATGGCGATTTTTGAAGTTTTGGAGGTGACTAAACCGCTGGAGAAACTTATTTTGGAAAAGCCCTCGGAGGTTGTAATGGAGGAGGAGGCCAAAAAACAGGGGATGCTGACTTTGCGCCAGGACGGCATTATGAGGGTGCTGGAAGGGCGCGTTGGACTGGAAGAGCTTTTAGAGGTAATATAA
PROTEIN sequence
Length: 571
MAMRGVLDILAGSGDITLQEAAEIRKLARSKNISIEEELLERGLDEQKILKAKGEAFGIPTFSLAGKKVPFDLLKNIPEESAKHYQFVPINLENGIISIGMVDPDNIEAKEALKFIATRLNQPFKIFLISRRDMAAVLGEYKGISGEVTKVLGELEVALSEESTLPKEMIREETSFVEDAPITKIVAVILRHATEGRASDVHIEPSGDKLRVRFRVDGVLYTSLFLPMKVHDSIISRIKILTNMQLDEKRKPQDGRFSAKIEGREIDFRVSTFPTYFGEKVAIRILDPETGVKNLDDVNFSPGHAKAVKEALTRAYGLILLTGPTGSGKSTTLYAMLQSLNEDRWNIVSLEDPVEYSIIGINQSQVRPEIGYDFAEGLRHILRQDPDVIMVGEIRDKETAQLAIHAALTGHLVFSTLHTNTAVGVVPRLIDMGVDPYLIAPTLIMAIGQRLVRTLCDDSKEEVLVEGKIKEAIMQEVNTMPESIKRNIKIPKVIYKPKISGTCPKGSRGRMAIFEVLEVTKPLEKLILEKPSEVVMEEEAKKQGMLTLRQDGIMRVLEGRVGLEELLEVI*