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RIFCSPLOWO2_01_FULL_OD1_44_22_rifcsplowo2_01_scaffold_3618_10

Organism: Candidatus Yanofskybacteria bacterium RIFCSPLOWO2_01_FULL_44_22

near complete RP 40 / 55 MC: 2 BSCG 41 / 51 MC: 1 ASCG 10 / 38
Location: 11755..12960

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 subunit RpoD; K03086 RNA polymerase primary sigma factor Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_44_24_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 401.0
  • Bit_score: 772
  • Evalue 3.90e-220
RNA polymerase sigma factor id=1915996 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria) similarity UNIREF
DB: UNIREF100
  • Identity: 77.1
  • Coverage: 401.0
  • Bit_score: 607
  • Evalue 9.10e-171
RNA polymerase sigma-70 subunit RpoD similarity KEGG
DB: KEGG
  • Identity: 57.3
  • Coverage: 365.0
  • Bit_score: 398
  • Evalue 3.10e-108

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Taxonomy

R_OD1_Yanofskybacteria_44_24 → Yanofskybacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1206
ATGCCTAAGAAGAAAAAGTCTTCTAAAAAAAGCGCGTCCAAACAGGCTTCTAAAAAGAGGAGCCGCGTTAAGTTAAAAAAACACAGGAAGTTGGCCAAGCCCAAGAAGCCGGGTGCTAAAAAATCTAAGGCTCCGATCAGCGAGAGCGCCATTGAGGCGCTTATGGAAAAGGGCAAGCATCGAGGGTTCGTTACCCAAGCGGAAATTATAAATTCCGTCCCTAATATCGAGAAAGATATTGTCGGCCTTGAAAGACTTTATGATCGTCTTGAATCGGCCAACATCAATATCATAGAGTCGGGGAGAGTATTTGAGGAAGAAAAAGCCCGCAAATATCAAGTCGAAAAAAAATTAGAAGAAGAGCTCGAAGAGGGTTCATCGGCCGATTCGGTTCAGATGTATTTGCGCGAGATCGGAAGATATCCTCTTCTGTCCAGTGAGGAAGAGGTCGAGTTGGCCAAAAGAATAGAAAAAAATGATGAATCTGCCCGCCAGAAATTGGCGGTCTCAAACTTAAGATTAGTGGTTTCAATAGCAAAAAAGTACGTCGGCCGATCGGCCAATCTTACCCTTCTCGATCTGATACAGGAGGGTAACATCGGCTTATTTAAGGCAGTCGAAAAATTTGATTATAAAAGAGGCTATAAATTCTCAACCTATGCCACTTGGTGGATCAGGCAAGCCATTACCAGAGCATTGGCAGATCAGGGCAAAACCATCCGCATTCCGGTGCATATGGTGGAAACTATCAATAAATATCAGCAGGTGGTCCGAAGATTGGTTCAGGATTTAGGCAGAGAGCCTTTGCCGGAAGAGGTGGCTTCGGAAATGGGCGTAGAGGTGGACAAGATAAGGTATATCCAGAAAATTTCTCAAGACACCGTTTCTCTTGAGGCGCCCGTCGGTCAGGATGATGAAGACAGCAATTTAGAAAGCTTTATACCCGACGAGGACTCCATTACCCCGTCTGTTTCTACGGCCAGGAAGATTTTAAAAACACATCTTCAGGAGATAATAAACGATCTTACTCCGCGCGAACAGAAAATTCTTGACATGCGATTCGGCCTGACTGACGGAGTTACCCATACCCTTGAAGAAGTGGGGAAGGTCTTCTCTGTTACCCGTGAAAGGATCAGGCAGATCGAAGCCAAGGCTCTTGAAAAAATACGCCAGCATCACAAAGTCGAGAAATTAAAAGGTTATTAA
PROTEIN sequence
Length: 402
MPKKKKSSKKSASKQASKKRSRVKLKKHRKLAKPKKPGAKKSKAPISESAIEALMEKGKHRGFVTQAEIINSVPNIEKDIVGLERLYDRLESANINIIESGRVFEEEKARKYQVEKKLEEELEEGSSADSVQMYLREIGRYPLLSSEEEVELAKRIEKNDESARQKLAVSNLRLVVSIAKKYVGRSANLTLLDLIQEGNIGLFKAVEKFDYKRGYKFSTYATWWIRQAITRALADQGKTIRIPVHMVETINKYQQVVRRLVQDLGREPLPEEVASEMGVEVDKIRYIQKISQDTVSLEAPVGQDDEDSNLESFIPDEDSITPSVSTARKILKTHLQEIINDLTPREQKILDMRFGLTDGVTHTLEEVGKVFSVTRERIRQIEAKALEKIRQHHKVEKLKGY*