ggKbase home page

RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_818

Search features with annotation key words

Displaying items 31-60 of 83 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_818_31

Not on your lists

comp(25645..25869)
DNA (225bp) protein (75aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT56983.1}; TaxID=1618652 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_44_23.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_818_32

Not on your lists

26118..27743
DNA (1626bp) protein (542aa)
bpo:BP951000_0805 polyA polymerase family protein; K00970 poly(A) polymerase [EC:2.7.7.19] id=3345208 bin=GWC1_OD1_38_17 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
PolyA polymerase {ECO:0000313|EMBL:KKT56982.1}; TaxID=1618652 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_44_23.;"
polyA polymerase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_818_33

Not on your lists

27745..28650
DNA (906bp) protein (302aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT56981.1}; TaxID=1618652 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_44_23.;"
id=2193046 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_818_34
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(28746..29600)
DNA (855bp) protein (285aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
hypothetical protein id=2122848 bin=GWB2_Chloroflexi_54_36 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_818_35
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(30163..31626)
DNA (1464bp) protein (488aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI0003821871
pectate lyase Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
pectate lyase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_818_36

Not on your lists

comp(31634..31804)
DNA (171bp) protein (57aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU29765.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_818_37
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

31911..33116
DNA (1206bp) protein (402aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_818_38
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

33159..34826
DNA (1668bp) protein (556aa)
long-chain-fatty-acid--CoA ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
Putative long-chain-fatty-acid--CoA ligase n=1 Tax=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) RepID=C1D1I3_DEIDV
long-chain-fatty-acid--CoA ligase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_818_39

Not on your lists

34874..36190
DNA (1317bp) protein (439aa)
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Leptonema illini DSM 21528 RepID=H2CF02_9LEPT
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:KKT29999.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
acyl-CoA dehydrogenase, short-chain specific
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_818_40
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

36192..36638
DNA (447bp) protein (149aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_818_41

Not on your lists

36729..38015
DNA (1287bp) protein (429aa)
fadA; acetyl-CoA acyltransferase (EC:2.3.1.16)
Acetyl-CoA acyltransferase n=1 Tax=Nonlabens dokdonensis (strain DSM 17205 / KCTC 12402 / DSW-6) RepID=L7WCH5_NONDD
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:KKU29760.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_818_42

Not on your lists

38067..39218
DNA (1152bp) protein (384aa)
Acetyl-CoA acetyltransferase n=1 Tax=Cecembia lonarensis LW9 RepID=K1LXG4_9BACT
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:KKU29759.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
acetyl-CoA acetyltransferase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_818_43

Not on your lists

comp(39242..41194)
DNA (1953bp) protein (651aa)
3-hydroxyacyl-CoA dehydrogenase /Enoyl-CoA hydratase n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BMC3_9EURY
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein {ECO:0000313|EMBL:KKU29758.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46
3-hydroxyacyl-CoA dehydrogenase/Enoyl-CoA hydratase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_818_44

Not on your lists

comp(41215..41445)
DNA (231bp) protein (77aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU29757.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_818_45

Not on your lists

41507..42667
DNA (1161bp) protein (387aa)
S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase n=1 Tax=Acetonema longum DSM 6540 RepID=F7NLE1_9FIRM
S-adenosylmethionine synthase {ECO:0000313|EMBL:KKT30006.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_818_46

Not on your lists

comp(42967..43599)
DNA (633bp) protein (211aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU29755.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_818_47

Not on your lists

43630..44334
DNA (705bp) protein (235aa)
Pseudouridine synthase, RluA family, ribosomal large subunit pseudouridine synthase D {ECO:0000313|EMBL:KKT30008.1}; EC=3.2.1.17 {ECO:0000313|EMBL:KKT30008.1};; EC=5.4.99.12 {ECO:0000313|EMBL:KKT30008
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036BCDA1
RluA family pseudouridine synthase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_818_48

Not on your lists


44322..44735
DNA (414bp) protein (138aa)
50S ribosomal protein L19 n=1 Tax=sediment metagenome RepID=D9PKR1_9ZZZZ
50S ribosomal protein L19 {ECO:0000313|EMBL:KKU29753.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
50S ribosomal protein L19
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_818_49
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

44848..46260
DNA (1413bp) protein (471aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_818_50
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

46267..46785
DNA (519bp) protein (173aa)
adenine phosphoribosyltransferase; K00759 adenine phosphoribosyltransferase [EC:2.4.2.7] Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
Adenine phosphoribosyltransferase n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G1J7_9FIRM
adenine phosphoribosyltransferase
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_818_51
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(46858..48438)
DNA (1581bp) protein (527aa)
phosphoglycerate mutase (EC:5.4.2.1); K15633 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.1] Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase id=3736606 bin=GWC2_OD1_43_27 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_818_52
GWA1_OD1_44_25, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

48561..50087
DNA (1527bp) protein (509aa)
metal dependent phosphohydrolase (EC:3.1.4.16)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PWR2_9BACT
Ribonuclease Y {ECO:0000313|EMBL:KKT59936.1}; TaxID=1618645 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA1_44_25.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_818_53

Not on your lists

comp(50107..50514)
DNA (408bp) protein (136aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU29748.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_818_54

Not on your lists

50779..51630
DNA (852bp) protein (284aa)
ParB-like protein partition protein {ECO:0000313|EMBL:KKU29747.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
parB; chromosome partitioning protein ParB; K03497 chromosome partitioning protein, ParB family id=5803595 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
chromosome segregation DNA-binding protein
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_818_55

Not on your lists

comp(51617..53335)
DNA (1719bp) protein (573aa)
relA; GTP pyrophosphokinase (EC:2.7.6.5)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI0003669F28
GTP pyrophosphokinase {ECO:0000313|EMBL:KKU29746.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_818_56
R_OD1_Giovannonibacteria_45_140, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

53395..54459
DNA (1065bp) protein (355aa)
Putative uncharacterized protein Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated
Putative uncharacterized protein id=4349609 bin=GWA2_CPR4_42_17 species=Schistosoma mansoni genus=Schistosoma taxon_order=Strigeidida taxon_class=Trematoda phylum=Platyhelminthes tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_818_57

Not on your lists

54539..54847
DNA (309bp) protein (103aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU29744.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_818_58

Not on your lists

comp(54858..57077)
DNA (2220bp) protein (740aa)
DNA topoisomerase I, DNA topoisomerase I {ECO:0000313|EMBL:KKT30019.1}; EC=5.99.1.2 {ECO:0000313|EMBL:KKT30019.1};; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 n=1 Tax=uncultured bacterium RepID=K1ZHR3_9BACT
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_818_59

Not on your lists

comp(57074..57820)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EB47_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKU29742.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_818_60

Not on your lists

comp(57821..58693)
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PZ26_9BACT
Protecting protein DprA protein {ECO:0000313|EMBL:KKT30021.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;"
DNA protecting protein DprA
Displaying items 31-60 of 83 in total

View Taxonomy