ggKbase home page

RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_16918_9

Organism: Candidatus Giovannonibacteria bacterium RIFCSPLOWO2_01_FULL_45_140

near complete RP 43 / 55 BSCG 47 / 51 ASCG 10 / 38
Location: 5771..6031

Top 3 Functional Annotations

Value Algorithm Source
transmembrane_regions Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 86.0
  • Bit_score: 167
  • Evalue 9.50e-39
transmembrane_regions id=5227144 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria) similarity UNIREF
DB: UNIREF100
  • Identity: 42.2
  • Coverage: 83.0
  • Bit_score: 74
  • Evalue 4.60e-11

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_OD1_Giovannonibacteria_45_140 → Giovannonibacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 261
GTGATAGCAGAAGCCAAAACAGTTGACGAGATAATCGGCGTTGTCCAATCATCGCTCATTCGGCCTGTTGAGGGTTTGCTTTTTGCTTTAGCAACCCTTGTGTTTATTTACGGCGTTGTTGAATATATGGCAGGAGCTTCAAACGAAGAAGCAAGAACCAAGGGAAAAACTCATATGATTTGGGGGTTGGTTGGGCTCTTTATAATGTTTTCCGTAAGCGGCATAATAGCAGTGCTTAAAAACTTTTTTGGAGTCCAATGA
PROTEIN sequence
Length: 87
VIAEAKTVDEIIGVVQSSLIRPVEGLLFALATLVFIYGVVEYMAGASNEEARTKGKTHMIWGLVGLFIMFSVSGIIAVLKNFFGVQ*