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RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_16918_26

Organism: Candidatus Giovannonibacteria bacterium RIFCSPLOWO2_01_FULL_45_140

near complete RP 43 / 55 BSCG 47 / 51 ASCG 10 / 38
Location: 19853..21880

Top 3 Functional Annotations

Value Algorithm Source
mfd; Transcription-repair-coupling factor (EC:3.6.4.-) Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_45_140_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 675.0
  • Bit_score: 1319
  • Evalue 0.0
Transcription-repair coupling factor id=2824521 bin=GWC1_OD1_38_17 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation similarity UNIREF
DB: UNIREF100
  • Identity: 47.6
  • Coverage: 683.0
  • Bit_score: 615
  • Evalue 5.60e-173
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 44.9
  • Coverage: 579.0
  • Bit_score: 469
  • Evalue 1.40e-129

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Taxonomy

R_OD1_Giovannonibacteria_45_140 → Giovannonibacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 2028
TTGAAACAAAGTTTAGATAAGATTTTAATAGCTGCGGTTACCCCCTTCTTTTTGGATAAGGGGGCGGATTGGTTTACAAAGAATTTAAAAGAAATAGAAGAAAATCGGGAGGCAAATCAGTTTTGGAGAAGAAATGCTTTGATTTTTGAGGTCGGCAAGCAAATCAAGCTTTCGGAGTTTTTAAGAAATATCGCGGAGCTTGGTTACACGAAAGTTTGGGAGGCTCAACATCGCGGAGAGTTTTCGCAGAGAGGCGGAGTTGTGCATATTTTTCCAATAAATTCGGATAAAATTTTCGCGTTTGAGTTTGAGGGGAATATTATAGCATCCGTATCGGAGCAAATCCAGAATTTTTCTGAGACGCGTCGGAGCCCGCCCCGTTTCGGGGAAGGGTTAAGCGCGAAGAAAATTACTGGATTTGCGAACGGAGATTACGTCGTCCATATTGACCACGGCATCGGTGTATACCGCGGACTCACGCAGACTGAAACGCAGAAAGACGCGGACATTATTATTGAATACGCGCCGCCGCGAGATCGCCCCAATTTCCCGGACCTTCTTTTTGTTCCAACAATTCAAATTAAAAAACTCTCTCCTTATCTGGGTTTTAAAAAACCGGAGATTCATAGGCTTGGCACGCGGGCGTGGAATTTAACCAAGAAAAAAGCCAAAGAGGACATTGTCGCTTACGCCAAAGAGCTTTTAAAAACTTTAGCAGAGAGAAAAACCGCAGTGCGCTGGCCCTACGAAGCCTTTCCGGATTTGGAAGAAGAACTAATTTCCAATTTTTCTTATGAATACACTCCGGACCAGAAAAAAGCGGTTGAAGAAATTTTTTCGGATATGTCTAAAAATGCGCCGATGGACAGAGTTCTTACAGGGGATGTTGGTTTTGGAAAAACCGAAGTTGCGGTACTTGCTGCTTTCCGCGCCGCGCTAAATCAAAAACAGGTTGCTGTGATGGCGCCGACAACTATTTTGGCCGACCAGCACACGGAAGTTTTTAAAAAAAGACTTTCGGGTTTTGGGGTAGAGGCGGCGCGGCTCACGCGGCTGGAAAGCGGCTCGCAAGTTAAAGAAATTTTGAAAAAGATTGAAGCGGGAAGCATTGACATCGTCATTGGCACGCACAAAATTTTATCTAAAACAATAAAGTTTAAAAATTTGGGGCTTTTGATTATAGACGAAGAGCAAAAGTTCGGCGTATCTCATAAGGAAAAATTTTCCGCCATAGGCGGATCCGCCTCTAGCGGGAAAAAAATAGTCACTCCAGACATGCTTACGCTTTCCGCAACTCCCATTCCTCGGACTCTGCATTTGGCGCTTTCCGGCATCCGCGCGATTTCCGCCATTGAAACTCCGCCGGAAGGAAGACTTGAGATTAAAACTTATGTTTTGCCGAAAAATTCCGCCAAAGGCGGATCCGCCTCTGGCGGAAAAAACATCATTAAAGAGGCAATCACATTTGAGCTCGCAAGGAACGGCCAGATTTATTTTTTAGCCAACCGCATCCATAAAATTCCGCAGCTTTTAGAAGAATTAAAAAAATTAAAAACCGCGGCGAGGATCGGCATTTTGCACGGCAGGATGCCGGAAGAAAAAATTGTAAAAACAATGCATGAATTTCGCGAAAGAAAATTAAATCTTTTGGTTTCAACTACAATTATTGAAAACGGGCTTGATCTTTCCAACGTAAATACTTTGATTGTGGAGGATTCCACAAAACTCGGCCTTTCGCAGGCGCATCAGTTAAGAGGCAGGATAGGCAGGGGAGACAAAGAGGCTTTTGCTTATTTTCTTTATCCCGCGCAACAATTAAAGGAAAAAGCCGCAGAGAGGCTTGAGGCTTTGGAACGTTATTCTTGGCTTGGAGCGGGACTGGAGCTTGCCAAAAGAGATCTTGAAATCCGTGGCGCCGGAAATATTTTAGGCCGCGCCCAGTCCGGCACCGCCTTCCGCATCGGATTAAATCTTTATTTTGAACTTTTGGATGAGGCGATTGCCGATTTACGACATCGCAAGTCGTAA
PROTEIN sequence
Length: 676
LKQSLDKILIAAVTPFFLDKGADWFTKNLKEIEENREANQFWRRNALIFEVGKQIKLSEFLRNIAELGYTKVWEAQHRGEFSQRGGVVHIFPINSDKIFAFEFEGNIIASVSEQIQNFSETRRSPPRFGEGLSAKKITGFANGDYVVHIDHGIGVYRGLTQTETQKDADIIIEYAPPRDRPNFPDLLFVPTIQIKKLSPYLGFKKPEIHRLGTRAWNLTKKKAKEDIVAYAKELLKTLAERKTAVRWPYEAFPDLEEELISNFSYEYTPDQKKAVEEIFSDMSKNAPMDRVLTGDVGFGKTEVAVLAAFRAALNQKQVAVMAPTTILADQHTEVFKKRLSGFGVEAARLTRLESGSQVKEILKKIEAGSIDIVIGTHKILSKTIKFKNLGLLIIDEEQKFGVSHKEKFSAIGGSASSGKKIVTPDMLTLSATPIPRTLHLALSGIRAISAIETPPEGRLEIKTYVLPKNSAKGGSASGGKNIIKEAITFELARNGQIYFLANRIHKIPQLLEELKKLKTAARIGILHGRMPEEKIVKTMHEFRERKLNLLVSTTIIENGLDLSNVNTLIVEDSTKLGLSQAHQLRGRIGRGDKEAFAYFLYPAQQLKEKAAERLEALERYSWLGAGLELAKRDLEIRGAGNILGRAQSGTAFRIGLNLYFELLDEAIADLRHRKS*