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RIFCSPLOWO2_01_FULL_OD1_45_140_rifcsplowo2_01_scaffold_5597_13

Organism: Candidatus Giovannonibacteria bacterium RIFCSPLOWO2_01_FULL_45_140

near complete RP 43 / 55 BSCG 47 / 51 ASCG 10 / 38
Location: comp(10580..12292)

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilus assembly protein PilB {ECO:0000313|EMBL:KKT30100.1}; TaxID=1618912 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 570.0
  • Bit_score: 1102
  • Evalue 0.0
general secretion pathway protein E id=5803081 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 51.7
  • Coverage: 573.0
  • Bit_score: 597
  • Evalue 1.00e-167
type IV pilus assembly protein PilB similarity KEGG
DB: KEGG
  • Identity: 43.7
  • Coverage: 577.0
  • Bit_score: 417
  • Evalue 5.40e-114

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Taxonomy

Parcubacteria bacterium GW2011_GWC1_44_10 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1713
ATGGCAACGAGAGGCCTTTTAGATGTTTTGGCGGGTTCTGGAGATATTACACTCCAGGAAGCTGCGGAGATACGAAAATTGGCGCGGTCCAAAAATATTTCCATTGAGGAAGAGCTTTTGGAGCGCGGCTTGGATGAACAAAAAATTCTCAAAGCCAAGGGGGAGGCCTTTGGCATTCCGGTGATGTCTTTGGCCGGCAAAAAAGTTCCGTTTGACCTTTTAAAAAATATTCCGGAAGAATCTGCGCGGCATTATCAGTTTGCGCCGATTGACACCGAGAACGGCGTAATTTCAATAGGAATGGTGAATCCAGAGAATATTGATGCCAAGGAAGCTTTGAAATTTATCGCTACGCGCTTAAACCAGCCCTTCAAAATTTTTCTTATTTCCAAACGGGACATGAACGGCGTTTTGGAAGAATACAAAGGCATTTCCGGCGAAGTGACAAAAGTTTTGGGCGAGCTGGAAATTGCTTTATCGGAAGAGCCGACAATTCCGAAAGAACTGGAACGGCCGGAAACGGCTTTTGTGGAAGAGGCTCCGATTACAAAAATAGTTGCGGTGATTTTGCGCCACGCTACCGAGGGCAGAGCCTCCGACATTCACATTGAACCCGGACGCGACAAACTAAGGGTGCGTTTCCGCGTGGACGGCATACTTTACACCAGCCTTTTTTTGCCGGTGAAATTGCACGACGCAATTGTTTCTAGAATTAAAATTTTGACAAATATGCAGTTGGATGAGAAAAGGAAACCGCAGGACGGAAGATTTTCGGCGAAAATTGATGGGAGAGAAATAGATTTTCGCGTTTCCACCTTCCCGACCTTTTTCGGAGAGAAAGCGGCAATCAGGATTTTAGATCCACAAACAGGCATCAAAACATTGGATGATTTTGAATTTTCGGAGGACCATGCCAAGGCGGTAAAAGAGGCGCTAGAGCATCCTTACGGGCTCATACTTCTTACCGGGCCTACCGGTTCCGGAAAGACAACCACGCTTTATGCGATGCTCCAGTCGCTAAACGAAGACCGGTGGAACACCGTCAGCCTTGAAGATCCGATAGAATATTCCATCGGTGGCGTAAACCAATCACAGGTTCGGCCGGAGATCGGCTACGATTTTGCCGAGGGGTTGCGCCATATTTTGCGCCAAGATCCGGATGTGATAATGGTAGGAGAAATCAGAGACAAAGAAACCGCGCAACTTGCCATACACGCCGCACTCACGGGGCATTTGGTGTTTTCCACGCTGCACACCAATACCGCCGTCGGCGTTATTCCTAGGCTTATAGATATGGGCGTTGACCCGTATCTTATTGCTCCAACGCTGATTATGGCTATAAGCCAGAGGCTTGTGCGCACGCTTTGCGAAGATTCCAAAGAAGAGGTTCTGCTTGAAGGCAAAGTAAAAGAAACCATCATGAAAGAACTGGAAGACATGGCCGAACCTGCGCGGCGCAAAATTAAATTGCCGCGCGTAATTTATAAACCGAAGATTTCCGCGACATGTCCTAAGGGTTCAAAAGGGCGCGTTGCAATTTTTGAAATTTTAAAAGTAACCACGGCCATGGAGCGCCTGATTTTGGAAAAATCGGACGAGATGGCGCTTGCGGGAGAAGCCAAAAAACAAGGCATGATAACTTTGCGCCAAGACGGGATTATGAAAGTGCTGGAAGGAAAAATTGGACTGGAAGAATTATTAGAAGTAATATAG
PROTEIN sequence
Length: 571
MATRGLLDVLAGSGDITLQEAAEIRKLARSKNISIEEELLERGLDEQKILKAKGEAFGIPVMSLAGKKVPFDLLKNIPEESARHYQFAPIDTENGVISIGMVNPENIDAKEALKFIATRLNQPFKIFLISKRDMNGVLEEYKGISGEVTKVLGELEIALSEEPTIPKELERPETAFVEEAPITKIVAVILRHATEGRASDIHIEPGRDKLRVRFRVDGILYTSLFLPVKLHDAIVSRIKILTNMQLDEKRKPQDGRFSAKIDGREIDFRVSTFPTFFGEKAAIRILDPQTGIKTLDDFEFSEDHAKAVKEALEHPYGLILLTGPTGSGKTTTLYAMLQSLNEDRWNTVSLEDPIEYSIGGVNQSQVRPEIGYDFAEGLRHILRQDPDVIMVGEIRDKETAQLAIHAALTGHLVFSTLHTNTAVGVIPRLIDMGVDPYLIAPTLIMAISQRLVRTLCEDSKEEVLLEGKVKETIMKELEDMAEPARRKIKLPRVIYKPKISATCPKGSKGRVAIFEILKVTTAMERLILEKSDEMALAGEAKKQGMITLRQDGIMKVLEGKIGLEELLEVI*