ggKbase home page

RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_114445_3

Organism: Candidatus Ryanbacteria bacterium RIFCSPLOWO2_01_FULL_47_79

partial RP 38 / 55 MC: 1 BSCG 38 / 51 ASCG 6 / 38
Location: 1675..2373

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal large subunit pseudouridine synthase F {ECO:0000313|EMBL:KKW19637.1}; TaxID=1618608 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Adlerbacteria) bacterium GW2011_GWC1_50_9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 232.0
  • Bit_score: 462
  • Evalue 3.80e-127
Ribosomal large subunit pseudouridine synthase F id=4649065 bin=GWA2_OP3_52_12 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors similarity UNIREF
DB: UNIREF100
  • Identity: 67.0
  • Coverage: 233.0
  • Bit_score: 311
  • Evalue 6.00e-82
tRNA pseudouridine synthase a similarity KEGG
DB: KEGG
  • Identity: 46.5
  • Coverage: 230.0
  • Bit_score: 188
  • Evalue 1.70e-45

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWC1_OD1_50_9 → Adlerbacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 699
ATGGACAAACCTGAATACCCGATGCGCATCAATAAATACCTTGCTTCCAAGAGGTACTGCACACGCCGTGAAGCTGATGAAATAATAGAGAAAGGAAAGGTCTTAATCAACGGCAAGCGCGCGGCCTTGGGCGATAAAGTCTCCGAGAAAGATGTGGTAGAAGTAAAATTCCGCCAAAAGAAATACCGGTATTTTGCGTACAATAAACCACGCGGAATAATCACCCACTCTCCACAGGGCGAGGAAGAAGATATCGCCATGAAGGTTCCTCTCGAGGGTGTTTTTCCCGTCGGCCGGCTCGACAAAGATTCCTATGGTCTCATCATCCTCACCGACGACGGGCGTATCACCGATAAACTACTAAATCCGGAATGCGTGCATGAAAAAGAATATCGTGTGAAAACCGCTGTAAATCTTCGTCCAAGCTTCAAAGAACATATGGAGAAAGGCGTTGATATTGACGATTATAAAACACGAAAATGCAGTGTGAATATCGTGGGTGAGCGCATTTTTACCATCGTGCTCACCGAAGGCAAGAAACACCAAGTCCGCCGCATGTGCGCGGCACTCCACAACGATGCTATTGATTTGCAGAGAATTCGGATAATGAACATCAGACTGGGCCATTTGCCGTCTGGCGCATATCGTCCTATCCAAGGTGCAGAATTGAGCACGTTCCTGAAAGCGCTCGGTTTCTGA
PROTEIN sequence
Length: 233
MDKPEYPMRINKYLASKRYCTRREADEIIEKGKVLINGKRAALGDKVSEKDVVEVKFRQKKYRYFAYNKPRGIITHSPQGEEEDIAMKVPLEGVFPVGRLDKDSYGLIILTDDGRITDKLLNPECVHEKEYRVKTAVNLRPSFKEHMEKGVDIDDYKTRKCSVNIVGERIFTIVLTEGKKHQVRRMCAALHNDAIDLQRIRIMNIRLGHLPSGAYRPIQGAELSTFLKALGF*