ggKbase home page

RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_18979_14

Organism: Candidatus Ryanbacteria bacterium RIFCSPLOWO2_01_FULL_47_79

partial RP 38 / 55 MC: 1 BSCG 38 / 51 ASCG 6 / 38
Location: comp(17163..19268)

Top 3 Functional Annotations

Value Algorithm Source
pbpB; penicillin-binding protein 2; K05367 penicillin-binding protein 1C [EC:2.4.1.-] id=5095212 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome similarity UNIREF
DB: UNIREF100
  • Identity: 46.6
  • Coverage: 683.0
  • Bit_score: 602
  • Evalue 3.90e-169
Penicillin-binding protein, 1A family, nonfunctional {ECO:0000313|EMBL:KKU86045.1}; TaxID=1618794 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_47_9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.0
  • Coverage: 701.0
  • Bit_score: 1372
  • Evalue 0.0
pbpB; penicillin-binding protein 2 similarity KEGG
DB: KEGG
  • Identity: 31.3
  • Coverage: 585.0
  • Bit_score: 245
  • Evalue 3.40e-62

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Parcubacteria bacterium GW2011_GWA1_47_9 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 2106
ATGAAAAATGTGCTTGCAGCAAAAAACTTAGAGAGAACAGGGAAGGCCATCTTACTGGCGTCTGTCGCCCTCTATACCGGCTCGTACTTTATGAGTAAGCGCATTTTTACTCTCTACGAAAACCAGAAATCGGCTATCGTGCAAGACCGCAATAGTACGGAAATATTTATACAGCCGAATGTGAAGGGGCACTATATGCGCCATACGGAATCTCTGACCGGCGAGATAAGCAGGTTACTGACTGCAAAAGAAGATCGTTTTTTCTTCTACCATCCGGGCATTAATCCGGTAAGCATCGCCCGCAGTCTCGCGCGATATCCCTTCTCTAGGCGTCTGGAAGGATCAAGCACGCTGACTCAACAGCTCGTGAAAACACTCATCGGAAACGAAAACAAAAGAACAATGAGCAACAAAATCATTGAGAGCTTTTATGCGTTAAGTCTGGGGATTCATACAAGCAAACCAGAAATATTAAAAATGTATGCGAATACCGCGTACTTTGGCAACCGCGCGGAAGGCATCGTTGAAGCAAGCAAAACATATTTCAACGCGCCTCCTGAATCGCTCAACACGGTCCAAATACTCCAACTCATTGCCACACTGAGCAACCCAGACGATTATCCAGGTACACTGAAAAACAAGAGAAAAACTATAGCTTTGGCAAACCAGCTAAAAATACCCGTTGACGAAAAAACCATAGACGCCCATGAAACCGATGAAGATAAATATATATATCGGAGAAAGAACATCAATGTATTCGAACTCGAGCCGTTCGAGCCACGCTGTGAAAAGCCCTGTTCACTTACTATCGACCAGTCGCTTACCAACACCGTACGCGAGATTTTAAGAACAAACCTCGACAGTCCATCGTTCGCGAGCGTAAATAACGGCGCTGTAGTTGTCATCCAAACGGGTAAAGAGATGAAAGAAAATGAACTCCTCGCCATCGTTGGTTCCCCGCATCCCCTTTCCTCCGAGAAAGGACACCAAATCAATATGGCTGTTCATCCGCGTCCGATTGGTTCAACCGCGAAACCCTTCATCTTTGCAAAAGCATTTGAAAAAGGCGCTCGTCCGTACACTCAAGTTGATGACATTGAGTACAAGTACGATATCGGCACCGGCTTCGCTTTCTATCCGAAAAATTACGACGGCCAATATCGCGGGACGGTTAGTCTCCATCAAGCGCTTTCCAACAGTTTAAACGTCCCCGCCGTACGGGTTTTGCAATATGCGGGGCTTGGCGCATTCTACGACTTTCTAAAAAGCGACCTCTCCTTCGAGCCGCTGCAACCCCTTGAAACATACGAGCTTTCCATAGCGCTTGGTGGGCTTGAAATGGACTTACTGACTCTTGCAAATTACTTTACGCTTTTTCCCAATGAAGGAACGCTCAAACCCCTAAAACTTAGTGAAGATGATACAATCAAGTTTTCGATGGCAAAACCGTATGATAATCATCAGGTTATTGATCCGGCATACATACAACTCGTAACAAAAATCCTTTCTGATCGGGAGACAAGCATTGACCAGTTCGGCCTCAAAAGCAACCTTAACCTGCCTGCAACACAATACGCCGTAAAAACCGGCACTTCCTATGACTACCACGACAGCTGGGCAATCGGATACACCCCGGACTTCCTCGTTGGAGTTTGGCTCGGCAATAGCGATAACAAACCCATGTATCGCCTTTCGGGGTCAATCGGGGCTGGCAAAATCTGGCACGAAGTAATGGAAACTATGCTCAACTCAACATACAACAAAGAAACCGCCTTTAACTTTGACCGTATCAAAGAATATGCAAAATCAGGAAATATCGAATATGGACTCGACGGAGACGAGTATGATTCCGCGCGCGACTTACTAAAATTGAACTATCTTATTTTACAACCGCATGATTTCGACACGCTTCAATACACCGCGGGAATAAAAGTTCCTCTTCTCTCAAACGAAGACGTGCTGTGGTACATTAATAATTCCCCCGCCGGACAGGGTATTCGAGAAACTTGGGAACCAAAAAAACCCGGTGTATATACAATCTCCGCGAGAAATCCCCGCGGCAAGATGGAAAAAATAAAAGTTATCATCAAGGAGCAGGACGAATGA
PROTEIN sequence
Length: 702
MKNVLAAKNLERTGKAILLASVALYTGSYFMSKRIFTLYENQKSAIVQDRNSTEIFIQPNVKGHYMRHTESLTGEISRLLTAKEDRFFFYHPGINPVSIARSLARYPFSRRLEGSSTLTQQLVKTLIGNENKRTMSNKIIESFYALSLGIHTSKPEILKMYANTAYFGNRAEGIVEASKTYFNAPPESLNTVQILQLIATLSNPDDYPGTLKNKRKTIALANQLKIPVDEKTIDAHETDEDKYIYRRKNINVFELEPFEPRCEKPCSLTIDQSLTNTVREILRTNLDSPSFASVNNGAVVVIQTGKEMKENELLAIVGSPHPLSSEKGHQINMAVHPRPIGSTAKPFIFAKAFEKGARPYTQVDDIEYKYDIGTGFAFYPKNYDGQYRGTVSLHQALSNSLNVPAVRVLQYAGLGAFYDFLKSDLSFEPLQPLETYELSIALGGLEMDLLTLANYFTLFPNEGTLKPLKLSEDDTIKFSMAKPYDNHQVIDPAYIQLVTKILSDRETSIDQFGLKSNLNLPATQYAVKTGTSYDYHDSWAIGYTPDFLVGVWLGNSDNKPMYRLSGSIGAGKIWHEVMETMLNSTYNKETAFNFDRIKEYAKSGNIEYGLDGDEYDSARDLLKLNYLILQPHDFDTLQYTAGIKVPLLSNEDVLWYINNSPAGQGIRETWEPKKPGVYTISARNPRGKMEKIKVIIKEQDE*