ggKbase home page

RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_7758_1

Organism: Deltaproteobacteria bacterium RIFCSPLOWO2_02_56_12

near complete RP 49 / 55 MC: 2 BSCG 47 / 51 ASCG 12 / 38 MC: 2
Location: comp(1..480)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 84.3
  • Coverage: 159.0
  • Bit_score: 270
  • Evalue 1.50e-69
Transcriptional regulator, LysR family id=3666476 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 55.6
  • Coverage: 153.0
  • Bit_score: 161
  • Evalue 9.00e-37
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 47.6
  • Coverage: 147.0
  • Bit_score: 141
  • Evalue 2.10e-31

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Deltaproteobacteria_57_22 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 480
ATGGTAAAGTCCAAAGACGATCTCGATCTCCGTAAGCTGGAGCTCTTCTATTGGGTGGCCGAACTAAAGAGTTTTTCGCTGGCCGCGGACCATCTCTCCTTGAGACAGCCCACGGTCAGTGCGCACGTCCGCGAACTGGAGGAAAAGCTGGGGGGAAAAATTTTAAACCGGGTGGGGGGAGGGGTAACGCCGACAGCCTTGGGCCAGGTTCTCCTGGAGCGGGCAAAGGCGTTGTTGGGCTTGAAGAGAGAGACCCTTGCCGCTCTCGACCACTTTCACGGAAGGGTCAGGGGAGAACTCCTGATCGGAGGAAGCAACATCCCCGGCGAATATATCCTGCCGCGGAAGCTGGGGGCTTTCATTAAAAAATACCCGGAAGTAAAGCCGATCCTTCGCATCGGCGATTCTGCGGGGATCGTGGAGACTGTGCTGGATGGGGAGGTGGAAGTGGGCTTCGTCGGCTTTAAAGGGGAAGACAGG
PROTEIN sequence
Length: 160
MVKSKDDLDLRKLELFYWVAELKSFSLAADHLSLRQPTVSAHVRELEEKLGGKILNRVGGGVTPTALGQVLLERAKALLGLKRETLAALDHFHGRVRGELLIGGSNIPGEYILPRKLGAFIKKYPEVKPILRIGDSAGIVETVLDGEVEVGFVGFKGEDR