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RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_2678_1

Organism: Deltaproteobacteria bacterium RIFCSPLOWO2_02_56_12

near complete RP 49 / 55 MC: 2 BSCG 47 / 51 ASCG 12 / 38 MC: 2
Location: comp(90..3596)

Top 3 Functional Annotations

Value Algorithm Source
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] Tax=GWD2_Deltaproteobacteria_55_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 97.3
  • Coverage: 999.99
  • Bit_score: 1935
  • Evalue 0.0
Transcription-repair coupling factor id=1801652 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 98.7
  • Coverage: 999.99
  • Bit_score: 1966
  • Evalue 0.0
mfd; transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 49.1
  • Coverage: 999.99
  • Bit_score: 1100
  • Evalue 0.0

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Taxonomy

GWD2_Deltaproteobacteria_55_8_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3507
ATGATTTCCTCGAGCTTACAGGAAAAGATAACGCCCCTTGTGCGGGAAAAGTGGCAAGGGGAGAAAAGGGTTTACGGTCTTAAAGGCGGCGCCCGCGCTTATCTCCTCTCGTTGATCGCTCAGAGGAGCCGCCAGCCCATTCTCATCATTGCACCGACGCCGCCTGAGGCGGAGAGACTTTTCTTCGATCTGGCTTTTTTCCTGGGAGAAGAAAGGGATCTCTCCCCGCTCGAGAAACGGCTCCATTTTTTTCCTTCCTGGGAGATTCTGCCTTTTGAAAGGCTTTCTCCTCATCCAGACAATGTCGCGGCGCGCCTGGAGGGACTCTACCATCTCCTGGAAGGTCAGGCCCCGATCCTGATCTCCACGCCGGCGGCGCTGATGCAAAGAACGATCCCGAAAGAGGCCTTGAAGCAGTCCTACCGTTATCTGGTGGCCGGCTCGGAAATCGCGCGCGAGGATCTCCTCTCCCATCTGGCGGCCTGGGGTTTTCAGAATGTCCCCCTGGTGGAGGAGCGGGGTGACTTCAGTGTGCGGGGCGGGATCGTGGATATTTTTCCCCCTGCCCATTCGCGCCCCATGCGCCTGGAATTTTTTTCCGACAGACTGGAATCGATTCGAGAGTTCGATCCTTCCACTCAACGCTCCCGCGACCGCCATGAGGCACTTTTGCTTTTGCCCATGAAGGAGTTTTCGCTGAAACGGGAAAGAATAGAGATCGTGGAGAAAGGGATCGAGAAAAGGGCTGAAGAGTTGGAGATGGGACGGAAGGAGAAAAACTCCCTTCTCGAATCGGTCAGATCCGGAGTTCCCTTTGCCGGGATGGAGTTCTTGATTCCCTATTTTTATTCTAATCTCTCCCCGCTTTTTTCTTATCTGCCGGCCGAGACGCTGGTATGGCTGGATCAGGCCGCTCAGGTGGAGACGGAGGTGGAGCGTTTTGAGCGTCTGACATGGGAAAGAGCGGCCAAGGCAAAGGGGGAAGGCTATTTTACTCCTCCGGTCGAGAGTCTTTATCTCAGCGAGAAAGAATGGCGTGATGAGATCTCCTCCTTCCGCCAGATCCACAGCGAGTCGCTGGAGGTTATGCCCTCCAAGGAAAAAAGCCGTGACTCTATTTTTACGATAAGATCCTACCTCAATACGGATATCCACCAGGAGATCTCCTCCCTGCAGGTCAAAGAGCCTTCCCTGGCCCCGCTTGTGGGGCGACTCAAGGAATGGGAAGCGGATAGAGTTGTTTTCGTAGCGCCTACCCATGGCGACGCGACGCGGCTGAGAGAACTGGTTGCCCATTACGAGCTCGATCTTCCTCTGGCGGAGATCCCCTTTCCCCTGCTCCATGCGGGTGAAGAACCGGCCCGTTGCATCCTGGTGGGAGGGCTGACCCAGGGTTTTCGCCTGCCCGAAGAACGCTTGATCCTGGTCACAACGGATGAAATCTTCGGCACCAGGCGGAGCCAGCGCGGCAGCGCAAAAAAGAGCTATCCCAGCCATTTCATTACCAGTCTGAGCGAGCTCAAGCAGGACGATTATGTGGTCCATCTGGACCATGGGATCGGTATCTACCGGGGCCTTAAGTTCCTTAAGGTGGCCGGTACCGAGGGAGAGTTCCTCCATCTGGAGTACGAGGGCGCGGACCGTCTCTATCTTCCCGTAGATCGGATCAACCTCGTCCAGAAATATATCGGGGGTGACGGAGCCCAGCCGACCTTGGATCGGCTTGGAGGCCATTCGTGGGAGAGAGTGAAGGCCAAGACCCGCAAGTCGATTCTGGCCATGGCCCAGGAGCTCATAGGAGTCTATGCGGCGCGCGAAGTACATGAGGGGCATGCCTTCCCCGCTCCGGACCATCTCTATCGGGAATTTGAGGCCTCCTTTGAATTTGAAGAGACGCCGGATCAAGAGCGGGCCATCGAGGAAACACTCTCAGACATGCAGAAGAAGAAACCGATGGACCGCCTCGTCTGCGGCGACGTGGGCTATGGAAAAACGGAGGTGGCGCTCAGGGCCGCCTTCCTCGCCGTGATGGACGGGAAGCAGGTGGCCGTGCTTGCCCCCACGACGGTCCTGGCTCAACAGCACCTGCAAACCTTTCGCCACCGTTTTCGGAGCTATCCGGTCAGGGTGGAGATGGTAAGCCGTTTTCTGACCTCCAAAGAAAGTCAGCAGGCGCTTCGAGATTTGGCGAAGGGGACGGTCGACATTGTCATCGGTACGCACCGGTTGCTCCAGAAAGACGTCCAATTTAAGGATCTGGGGCTTGTCGTGATCGATGAAGAGCATCGCTTCGGTGTGGTCCATAAGGAAAGGCTCAAGAAGTTCCGCTCTACTGTGGATGTCGTGAGTCTGACGGCCACGCCGATCCCGCGTACCCTCCATATGTCGCTGATCGGGATCCGCGACATGAGCATTATCGAAACCCCGCCGCTGGATCGCCTGGCGATCCACACCTATATCACGAGGTACGATGAGGAAGTGATCCGGGACGCGGTGCTGCGCGAGATCCAGCGCGGCGGGCAAGTTTTTTTCCTTCACAATCGAGTTGAGACTATCTCGCGGATGGCGCAGAAACTCTCCGATCTGCTCCCTGAGACGAAGATCGCTGTGGCACACGGCCAGATGCGGCCGCGGGAGCTGGAAAAGGTCATGCTCGATTTCTTGGAAAACCGCACGCAGATGCTGGTCTGTTCCGCCATCATTGAGTCCGGACTCGATTTTCCCAACGCCAATACCATCATCATCAACCGGGCCGACAAATTCGGCCTGGCCCAGCTTTATCAGCTGCGCGGACGGGTCGGGCGCTCCCATCACCGCGCCTATGCCTATTTGCTGATCCCCGGCGAGAAAATCATAACGCGCGATGCCGAGAGAAGGCTAAGGGCGCTTCAGGAGCTGGACGAGCTAGGGGGCGGCTTCAAGCTGGCGCTGCACGATCTGGAAATCCGCGGCGCGGGAAATCTCCTGGGGAAACAACAATCCGGCCATGTCACTGCGGTAGGATTCGAACTCTACACCGAGATGATGCAGAAGGCGGTGCAGGAGCTCAAGGGCGAGGCCGTGGAGCCGGAGGTGGAACCGGAGATTCGGTTGGGGATTCCCGCCTATTTTCCGCAGGACTATATTCCCGACGCGAATCAGAGATTGCTCTTTTACAAGCGCTTGGCGAGCCTCGGCGATCTTAAAGAGTTGGATGGGCTTAAAGAGGAGATCCAGGACCGCTACGGTCCCTACGCGCCTGAGGTGGAAAACCTCTTCCTGGTCATGTATCTCCGCCGCGTGCTCAAAGATTACTTAGTGCAGCAGATCACCTACAACGACGGGAGACTCTCCCTCCTCTTCCACCCTGACTCTCCGGTCAAGGTGAAGCGGTTGGTTGATCTGATAGGAAAGGATCAGGCCCGCTATCGTTTTTCGCCGGAGGGCCGGCTCTCTTTTTCGCCGCAGAGCCGGGATTGGAACGGGCTGATTCCCGAGGTGATCGGTTTCTTGCAGGCCATCCAGTAG
PROTEIN sequence
Length: 1169
MISSSLQEKITPLVREKWQGEKRVYGLKGGARAYLLSLIAQRSRQPILIIAPTPPEAERLFFDLAFFLGEERDLSPLEKRLHFFPSWEILPFERLSPHPDNVAARLEGLYHLLEGQAPILISTPAALMQRTIPKEALKQSYRYLVAGSEIAREDLLSHLAAWGFQNVPLVEERGDFSVRGGIVDIFPPAHSRPMRLEFFSDRLESIREFDPSTQRSRDRHEALLLLPMKEFSLKRERIEIVEKGIEKRAEELEMGRKEKNSLLESVRSGVPFAGMEFLIPYFYSNLSPLFSYLPAETLVWLDQAAQVETEVERFERLTWERAAKAKGEGYFTPPVESLYLSEKEWRDEISSFRQIHSESLEVMPSKEKSRDSIFTIRSYLNTDIHQEISSLQVKEPSLAPLVGRLKEWEADRVVFVAPTHGDATRLRELVAHYELDLPLAEIPFPLLHAGEEPARCILVGGLTQGFRLPEERLILVTTDEIFGTRRSQRGSAKKSYPSHFITSLSELKQDDYVVHLDHGIGIYRGLKFLKVAGTEGEFLHLEYEGADRLYLPVDRINLVQKYIGGDGAQPTLDRLGGHSWERVKAKTRKSILAMAQELIGVYAAREVHEGHAFPAPDHLYREFEASFEFEETPDQERAIEETLSDMQKKKPMDRLVCGDVGYGKTEVALRAAFLAVMDGKQVAVLAPTTVLAQQHLQTFRHRFRSYPVRVEMVSRFLTSKESQQALRDLAKGTVDIVIGTHRLLQKDVQFKDLGLVVIDEEHRFGVVHKERLKKFRSTVDVVSLTATPIPRTLHMSLIGIRDMSIIETPPLDRLAIHTYITRYDEEVIRDAVLREIQRGGQVFFLHNRVETISRMAQKLSDLLPETKIAVAHGQMRPRELEKVMLDFLENRTQMLVCSAIIESGLDFPNANTIIINRADKFGLAQLYQLRGRVGRSHHRAYAYLLIPGEKIITRDAERRLRALQELDELGGGFKLALHDLEIRGAGNLLGKQQSGHVTAVGFELYTEMMQKAVQELKGEAVEPEVEPEIRLGIPAYFPQDYIPDANQRLLFYKRLASLGDLKELDGLKEEIQDRYGPYAPEVENLFLVMYLRRVLKDYLVQQITYNDGRLSLLFHPDSPVKVKRLVDLIGKDQARYRFSPEGRLSFSPQSRDWNGLIPEVIGFLQAIQ*