ggKbase home page

RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_315_20

Organism: Deltaproteobacteria bacterium RIFCSPLOWO2_02_56_12

near complete RP 49 / 55 MC: 2 BSCG 47 / 51 ASCG 12 / 38 MC: 2
Location: comp(15898..16860)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor id=1941177 bin=GWD2_Deltaproteobacteria_55_8 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 321.0
  • Bit_score: 631
  • Evalue 3.60e-178
sigma-70 region 2 domain-containing protein; K03089 RNA polymerase sigma-32 factor Tax=GWD2_Deltaproteobacteria_55_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 320.0
  • Bit_score: 631
  • Evalue 5.10e-178
sigma-70 region 2 domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 56.8
  • Coverage: 285.0
  • Bit_score: 321
  • Evalue 2.30e-85

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWD2_Deltaproteobacteria_55_8_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 963
ATGGCTGACGAGAATAACGATCCGATAGAGAAGAGCACTACGGACGAGACCGACCTCTTTAAAGATGTCGATCTTACCGAAGAAGAGGGATCTTCCGAGAAGGCCCTCGTCCCCTTCGACCCCCTTCAGAGGTATTTGGCGGAAATCCGCCGCACCCCTATCCTGAGTCGAGAGGAAGAGCACCGCATAGCCGTCGAATATAAAGAGTTTGGTAATCTTGAGGCCGCCTACAAGCTCGTTACCTCCAATCTCCGTCTGGTAGTGATGATCGCCCGGGGATACCAAAGGGCCTTTAAAAACCTCCTCGATCTCGTTCAAGAAGGGAACATGGGTCTCATGGAAGCGGTCAAAAATTTTGATCCTTATCGAGGGATCCGCTTCCCCTCGTATGCGGTCTGGTGGATCCGCGCTTATATCATCCGCTACATCATGAGCGATTGGCGGATGGTCAAGATTGGCACTACCCAGGCGCAACGAAAACTTTTTTTTAATTTGCATAAAGAAAAAGAGCGATTAGAGGCGGAGGGCTTTGCTCCTGGTCCGAAACTTTTGGCGCAACGCCTCAATGTGAAAGAGGGCGAGGTCGTGGAGATGGAGCAGCGTCTTGCCAATAGGGATCTCTCTACCGATGTCCCCATGGGGGACGGCGAAGAGGTAACCCTGCTTCATTTCCTTGCCGACAATAAGGAAACTCCGGAACAACGTTTCGCAAGCGCCGAATATCGCCAGGTCCTGAGCGCAAAGATGGAGGCGTTCGCCCGGGGCCTCAAGGATAAGGAGCTGATGATCTTCCGCGAGCGTCTTTTGAACGAAGAGCCGATGACCTTAAGAGAGATTGGTGAGAAATACGGTATCAGTCGCGAGCGGGTACGCCAGATTGAGGAGCGGATAAAAAAGAAGCTCAAGGCCTATCTCGGTAAAGAGTTCAAAGACGTCAAGGATTCCATGATCGGGGCCGAATAG
PROTEIN sequence
Length: 321
MADENNDPIEKSTTDETDLFKDVDLTEEEGSSEKALVPFDPLQRYLAEIRRTPILSREEEHRIAVEYKEFGNLEAAYKLVTSNLRLVVMIARGYQRAFKNLLDLVQEGNMGLMEAVKNFDPYRGIRFPSYAVWWIRAYIIRYIMSDWRMVKIGTTQAQRKLFFNLHKEKERLEAEGFAPGPKLLAQRLNVKEGEVVEMEQRLANRDLSTDVPMGDGEEVTLLHFLADNKETPEQRFASAEYRQVLSAKMEAFARGLKDKELMIFRERLLNEEPMTLREIGEKYGISRERVRQIEERIKKKLKAYLGKEFKDVKDSMIGAE*