ggKbase home page

RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_585_9

Organism: Deltaproteobacteria bacterium RIFCSPLOWO2_02_56_12

near complete RP 49 / 55 MC: 2 BSCG 47 / 51 ASCG 12 / 38 MC: 2
Location: comp(10054..11031)

Top 3 Functional Annotations

Value Algorithm Source
RluA family pseudouridine synthase (EC:3.2.1.17); K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 71.7
  • Coverage: 318.0
  • Bit_score: 463
  • Evalue 1.90e-127
Pseudouridine synthase id=1789175 bin=GWD2_Deltaproteobacteria_55_8 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 96.6
  • Coverage: 117.0
  • Bit_score: 228
  • Evalue 7.20e-57
RluA family pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 40.8
  • Coverage: 321.0
  • Bit_score: 204
  • Evalue 4.10e-50

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Deltaproteobacteria_60_16 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 978
ATGAGAGGTATGCCGTCGGATCAAGAGTCCAAGGCGCTCCAATGGATCGTTCCCTCCGGCCAACGCGCCATTCGGCTCGATGCCTTTGTGCGGCGCTGTTTACCGTACCTCTCTTCGAGGGAGGCGCAGAGGGCGATCGGCGAGAGGGTTTTTTGGGTCAATGACCGCCCCGGCAAGAAGGGGGACAAACTATTTGGCGGCGAGGTTCTCTCTTTTAAGGGCCCGCAGCACTTGTTGGCGCCGGCTCCGCTGCCCGCATGGCATCTTGAGCTTCCCGTGGTTTACGAAGACGAATCTCTCCTGGTTGTGGACAAGCCGGCGGGGATGGCGACGCACGGATTTTCCGGAAGAGAAAGAAATTCCCTGGCGAATTTTCTGGCTGCTACCCGTCCATCCCTTTGTCATGTGGGAAAGAGCCGATGGGAACCGGGTTTGCTCCATCGGCTGGACCGGGACACTTCAGGTCTCGTGCTGGTGGCCAAAGACCAGGATTCCTTTGAGGATCTCCGCTCCCAGTTCCGTCGCGGCGAGATCAAAAAAAAATACTGGGCATTGGTTTGGGGCAAGGTAAAGCGGGAAGAGGTCCTGGCTTCTCCTCTCGCCCACGCTCCGGGAGAGCGGAAAAAGATGACAACGGTGAAGACGGAAGAAGGAAAGAAAACTCGCGCGCGCAGCTGGAGGGCATTGACGCGCCTCAAGGCCCTAAGTTCGTCTCGAGGGCTCACTCTTCTCGAAGTTGGCATCGACACCGGCGTCACCCATCAAATCCGGGCCCACCTGGAAGCCTTTGGGCACCCGCTGGTCGGCGATCCCCTCTACGGCAAGCATCGCCCCGATCCCTTCGGCCTCGGGCGCCAGTTTTTACATGCTTTTTATCTGGGTTTCCGCCACCCGAAGAGCGGCCTGGAAGTCGCGGTCACGAGCCCTTTGCCGGAAGCTTTAAGAAAGGTCCTGGAGCGCTTAAAAATACGCCTCTAG
PROTEIN sequence
Length: 326
MRGMPSDQESKALQWIVPSGQRAIRLDAFVRRCLPYLSSREAQRAIGERVFWVNDRPGKKGDKLFGGEVLSFKGPQHLLAPAPLPAWHLELPVVYEDESLLVVDKPAGMATHGFSGRERNSLANFLAATRPSLCHVGKSRWEPGLLHRLDRDTSGLVLVAKDQDSFEDLRSQFRRGEIKKKYWALVWGKVKREEVLASPLAHAPGERKKMTTVKTEEGKKTRARSWRALTRLKALSSSRGLTLLEVGIDTGVTHQIRAHLEAFGHPLVGDPLYGKHRPDPFGLGRQFLHAFYLGFRHPKSGLEVAVTSPLPEALRKVLERLKIRL*