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RIFCSPLOWO2_02_CSX_56_12_rifcsplowo2_02_sub10_scaffold_420_11

Organism: Deltaproteobacteria bacterium RIFCSPLOWO2_02_56_12

near complete RP 49 / 55 MC: 2 BSCG 47 / 51 ASCG 12 / 38 MC: 2
Location: comp(12070..12783)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, winged helix family n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S2V2_THEOJ similarity UNIREF
DB: UNIREF100
  • Identity: 53.9
  • Coverage: 232.0
  • Bit_score: 254
  • Evalue 8.90e-65
two component transcriptional regulator, winged helix family; K07658 two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacter similarity UNIPROT
DB: UniProtKB
  • Identity: 85.2
  • Coverage: 237.0
  • Bit_score: 407
  • Evalue 1.10e-110
two component transcriptional regulator, winged helix family similarity KEGG
DB: KEGG
  • Identity: 53.9
  • Coverage: 232.0
  • Bit_score: 254
  • Evalue 2.50e-65

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Taxonomy

RLO_Deltaproteobacteria_60_19 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 714
ATGTCCGGGCAAAAAATCTTGGTAGTCGAAGACGAGCCCGATATCCGTAAGCTCGTCCACTATAACCTCGCCCAGGAGCGCTTCAAGGTCATTGAGGCGGAGGATGGAGAGAAAGCGCTCAAATTAGTACAGAGAGAAAAACCTCACCTGATCGTTCTGGATTTGATGCTGCCGGGACTCTCAGGACTCGAGTTGTGCAGAAACCTGCGCGAGCGGCCTGAAACGAGTCAAATCCCAATTCTCATGCTCACCGCCAAAGCCGGCGAGGCGGACCGCATAGTCGGCCTGGAGATGGGCGCGGATGACTATCTGACCAAGCCCTTCAGTCCCAGGGAGCTGGTGGCCCGGGTGAAGGCCATCCTGCGCAGGACCGAGATGCAGTCCAGTCATCCGGTGAGTGAAGTTTACGAAAAGGGCCCCCTCAAGATTAACTTCTCAACCTACGAGACCATCGTTAGAGGCAAAGCGGTGCGATTAACCCTCAAGGAATTTGAGCTTCTCGGCTTTTTGGTTCAAAATCCCAATCGGGTTCTGAGCCGGGACCAGCTGCTGGACCGGGTATGGGGCGGAGAGGTCTTCGTGGATCCCCGCACAGTGGATGTCCATATACGGAGATTGAGGAAAGCCATCGAGAAAAACGACCGTAAACCCGATTGGATTTTAACGGTCCGGGGAGTGGGTTACAAATTCCATGAAAAGGCCCTGGAAAAATAG
PROTEIN sequence
Length: 238
MSGQKILVVEDEPDIRKLVHYNLAQERFKVIEAEDGEKALKLVQREKPHLIVLDLMLPGLSGLELCRNLRERPETSQIPILMLTAKAGEADRIVGLEMGADDYLTKPFSPRELVARVKAILRRTEMQSSHPVSEVYEKGPLKINFSTYETIVRGKAVRLTLKEFELLGFLVQNPNRVLSRDQLLDRVWGGEVFVDPRTVDVHIRRLRKAIEKNDRKPDWILTVRGVGYKFHEKALEK*