ggKbase home page

rifcsplowo2_02_scaffold_1536_36

Organism: RIFCSPLOWO2_02_FULL_Archaea_Pacearchaeota_30_10

near complete RP 31 / 55 MC: 2 BSCG 21 / 51 MC: 1 ASCG 31 / 38 MC: 3
Location: comp(24615..25079)

Top 3 Functional Annotations

Value Algorithm Source
Homing endonuclease I-ApeII n=2 Tax=Crenarchaeota RepID=H5SVX5_9CREN similarity UNIREF
DB: UNIREF100
  • Identity: 45.7
  • Coverage: 138.0
  • Bit_score: 139
  • Evalue 3.50e-30
Homing endonuclease I-ApeII {ECO:0000313|EMBL:BAE03246.1}; TaxID=766501 species="Archaea; Crenarchaeota; Candidatus Nitrosocaldus; environmental samples.;" source="uncultured Candidatus Nitrosocaldus similarity UNIPROT
DB: UniProtKB
  • Identity: 45.7
  • Coverage: 138.0
  • Bit_score: 139
  • Evalue 5.00e-30
homing endonuclease I-ApeII similarity KEGG
DB: KEGG
  • Identity: 32.4
  • Coverage: 136.0
  • Bit_score: 85
  • Evalue 1.70e-14

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

uncultured Candidatus Nitrosocaldus sp. → Candidatus Nitrosocaldus → Crenarchaeota → Archaea

Sequences

DNA sequence
Length: 465
ATGGATGTAGCGCATGGGCAATCAGCAGGGAAGTACCAAAAGAGATTTTCAAAACAAAAATATCTTAATTATTATATTGCAGGATTTGTCGACGGAGAAGGAGCATTTCCTATTCAAATTAGGAAAACTTACGATACTAAATTTAAGTATACAATAACTCCGGAATTTAAGGTAAGTCAGCATAAAGATGGTAAAGAGATTTTAGAAATAATAAGAAATTCTCTAAGATGTGGTAAAATATCAATTAAATCTGGACAACCAAATCTTTTAGTTTTGGTTGAAAAGAATAGAAAAAATCTTATAGAAAAAATAATCCCTTTTTTTAGGAGATATCCTTTAATAGTTAAATCAAAACAATTTCAGTTATTTTCAGAAATTGTTGAAAGAATAGAAAAAGGAGAACACAAATCTGAAAAAGGATTCAAAAATTTAGTAGAACTTGTATATAAAACAAAAGGAAAGTGA
PROTEIN sequence
Length: 155
MDVAHGQSAGKYQKRFSKQKYLNYYIAGFVDGEGAFPIQIRKTYDTKFKYTITPEFKVSQHKDGKEILEIIRNSLRCGKISIKSGQPNLLVLVEKNRKNLIEKIIPFFRRYPLIVKSKQFQLFSEIVERIEKGEHKSEKGFKNLVELVYKTKGK*