ggKbase home page

rifcsplowo2_02_scaffold_2407_30

Organism: RIFCSPLOWO2_02_FULL_Archaea_Pacearchaeota_30_10

near complete RP 31 / 55 MC: 2 BSCG 21 / 51 MC: 1 ASCG 31 / 38 MC: 3
Location: 19937..20683

Top 3 Functional Annotations

Value Algorithm Source
2'-5' RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-] Tax=RBG_13_Pacearchaeota_36_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 56.8
  • Coverage: 148.0
  • Bit_score: 167
  • Evalue 2.10e-38
2'-5' RNA ligase n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZRC7_THELI id=5103102 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 44.3
  • Coverage: 140.0
  • Bit_score: 118
  • Evalue 8.00e-24
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 44.3
  • Coverage: 140.0
  • Bit_score: 118
  • Evalue 2.20e-24

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_13_Pacearchaeota_36_9_curated → Pacearchaeota → DPANN → Archaea

Sequences

DNA sequence
Length: 747
ATGAAAACAAGAGCTTTTATTGCTTTAGACCTTCCAGAAGAGGCTATTAATGAAATAAAACAGATACAGGAAAATATTAAAAGAAAGTTTATTTTTACAGAAATTTCTTCTATAAATAAAGAGAATTTTGAAAAACTTAAGAAATCAAAATTCTCTAAGAAGAAATCAGAGAACAAGTTCTCTGATACATTCAAAATCAAAGATTTTGAAGTCTTTGATGAATTTTCCTTAGGAAAATTGGATTATTCAAAGTTCTCTAAAAAAATTTCTGTTCCAAAAACTTTGAATGATAGAAATAAAGTTTTTGTTAGAGGTAAATATACAGAGCTTGAAAATTTACATTTAACTTTAAAATTTTTAGGAGAGATAAATAATGAAAAATTAGAAAAAGTTAAAAAAAGACTTTCAGAATTAAAATTTGAAGAATTTACAGCAAAGCTTGATAAGATAGGTATATTTTCAGGAAAAACACCAAGAGTTCTGTGGATAAAATTAAAAGGAGCAGATATATTGCAGAGAGAAATAGATAATGTGTTAGAAGATTTATTTGAAAAAGAAAAGAGGTTTATGGGGCATATAACAATAGCAAGAATTAAATATATTAAAGAAAAAAAAGAGCTTATAGAATATCTAAAAAAAATAAAAACAGATATCCGATTTACAGTAGACAAATTTTATTTAAAAAAATCCACTTTACTTCCAGAGGGTCCTATTTATGAAGTTATTGAAGAATATCCTTTAAAATAA
PROTEIN sequence
Length: 249
MKTRAFIALDLPEEAINEIKQIQENIKRKFIFTEISSINKENFEKLKKSKFSKKKSENKFSDTFKIKDFEVFDEFSLGKLDYSKFSKKISVPKTLNDRNKVFVRGKYTELENLHLTLKFLGEINNEKLEKVKKRLSELKFEEFTAKLDKIGIFSGKTPRVLWIKLKGADILQREIDNVLEDLFEKEKRFMGHITIARIKYIKEKKELIEYLKKIKTDIRFTVDKFYLKKSTLLPEGPIYEVIEEYPLK*