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rifcsplowo2_02_scaffold_55601_4

Organism: RIFCSPLOWO2_02_FULL_Archaea_Pacearchaeota_30_10

near complete RP 31 / 55 MC: 2 BSCG 21 / 51 MC: 1 ASCG 31 / 38 MC: 3
Location: comp(3531..4157)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5256 similarity UNIREF
DB: UNIREF100
  • Identity: 33.3
  • Coverage: 165.0
  • Bit_score: 81
  • Evalue 9.10e-13
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_13_Planctomycetes_63_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 32.3
  • Coverage: 198.0
  • Bit_score: 87
  • Evalue 2.30e-14
RNA polymerase sigma-E factor similarity KEGG
DB: KEGG
  • Identity: 30.6
  • Coverage: 209.0
  • Bit_score: 80
  • Evalue 7.40e-13

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Taxonomy

RBG_13_Planctomycetes_63_9_curated → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 627
ATGAGTTTTCTTAATAAACTCATGGAAACTTTCCCTCATAAAGTTGAGGCATTTACTCGAATGATTGAACGAGATTATGCAGAAGGAACCCCATTCTTTAGAAAATTTGTGAGCTTAGCTAAGAAAATATATCCTATATTACAAGAGCAGGATTTTGAAGATGTTTATCAAAATGCTTTATTGAGTCTTACTTGTAAAAATTCGGGCAGGTATGCCATAGAAAATTATTCATATGATATTGATCAAGAAAAAAGAATAGATGAAGATAGAATCTTAAGAAAGTGGTTTATTCGTTGTTTATTAAACAAATGTGTTGATTATATGAGACGTAAAAAAAATACTTTCTCTATTGATGATGTAGATGGACCTGATTTAAGTTTAGTTCGAGATTCTGAAGAAAATCCTTTAGAAATATTAATTAGAAGAGAAATAAAAGATAAGGTTAAACGAGAATACCATCGATTAAATCCAATTCATCATCAAGTTGTTAGACTAATTTATTTTGATGGATTAAAATATCATGAAGCAGCTGAAAAATTAGGGATTCCATTAGGAACAGTTAAAAGTAGATTGCATGCTGCTATTTCTCGTTTAGGAGAAAGATTAGAAGGATTAAAGGTTGCTTAA
PROTEIN sequence
Length: 209
MSFLNKLMETFPHKVEAFTRMIERDYAEGTPFFRKFVSLAKKIYPILQEQDFEDVYQNALLSLTCKNSGRYAIENYSYDIDQEKRIDEDRILRKWFIRCLLNKCVDYMRRKKNTFSIDDVDGPDLSLVRDSEENPLEILIRREIKDKVKREYHRLNPIHHQVVRLIYFDGLKYHEAAEKLGIPLGTVKSRLHAAISRLGERLEGLKVA*