ggKbase home page

rifcsplowo2_02_scaffold_27087_8

Organism: RIFCSPLOWO2_02_FULL_Woesearchaeota_32_17

near complete RP 37 / 55 MC: 1 BSCG 23 / 51 ASCG 32 / 38 MC: 1
Location: 4642..5619

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase D TruD; K06176 tRNA pseudouridine13 synthase [EC:5.4.99.27] id=5050697 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c similarity UNIREF
DB: UNIREF100
  • Identity: 39.6
  • Coverage: 328.0
  • Bit_score: 251
  • Evalue 1.00e-63
tRNA pseudouridine synthase D TruD similarity KEGG
DB: KEGG
  • Identity: 28.5
  • Coverage: 383.0
  • Bit_score: 133
  • Evalue 1.20e-28

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

archaeon GW2011_AR18 → Archaea

Sequences

DNA sequence
Length: 978
ATGTACAAAATAAAACAATGCCCTGAAGATTTTACTGTAGAAGAGGTTATGGAGTTAGAATTGACTAAAAAGGGGGTGTATAGCTATTTTTTAATTGAAAAAAGGAACTGGAATACAAAGGACATTGTAAAGATAATTGCTAAAAGGCTGAATATAAGGGAGAGGAGAATTAATATTGCAGGCATAAAGGACAAAAATGCTGTAACTAAACAGTATATTTCTGTTTTTAATGTAAACCCGAATAATGTTTTAAGAATCAAGATAGAGGGAGTAAAAATTAAATTTATTGGATTAGGTGATGAGAGAATAAGATTGGGCCAGATTGAAGAAAATAAGTTTAAAATAGTTGTCAGAAATTTAGATAATGAAGGTAGAAGGATTAAGTTTATTGAAAACTATTTTGATGACCAGAGATTTGGAGGGAGGAATCATCTTTTAGGTGAGGCTTTAACGAAAAAAGAATTTAGGAAATTTTGCTACATGCTAAGATTAAAATGGGAAGAAGGAGATTATGTCGGGGCTATAAGAAAACTAAAGAAAAGCCTATTAATTTTTTATATTAATGCTTACCAGAGTTATTTATGGAATAAAGCAGTTGAGAATTATCTTTCTAAGAATTGTTTAAACTGTTTTTTTTCTGATTATACAGTCGGAAGATTTGCTTTTTCTAGTGATAATGTAAAAAATTTTAAAATTCCTGTTTTAGGATTTGGAACTAATTTTAATAATAAAGAGATAAAGGAAATATATGAAGAAATTCTCATGAAAGAGGGAATAAAACTGGAAGATTTTATTTTTAGAGAGATACCTGAGCTTGTAAGCGAGGGGACTGAAAGGAACTTAATTGTAGATGTAAAAAATTTAAAGGTTGAATACTTGAATGATGAAAGGAATAAAGGCATGAAGAAGGCAATATTAAACTTTAGCCTGCCTTCTGGAAGTTATGGGACTATTGTTGTGAAGAAAATGTTTAACTAG
PROTEIN sequence
Length: 326
MYKIKQCPEDFTVEEVMELELTKKGVYSYFLIEKRNWNTKDIVKIIAKRLNIRERRINIAGIKDKNAVTKQYISVFNVNPNNVLRIKIEGVKIKFIGLGDERIRLGQIEENKFKIVVRNLDNEGRRIKFIENYFDDQRFGGRNHLLGEALTKKEFRKFCYMLRLKWEEGDYVGAIRKLKKSLLIFYINAYQSYLWNKAVENYLSKNCLNCFFSDYTVGRFAFSSDNVKNFKIPVLGFGTNFNNKEIKEIYEEILMKEGIKLEDFIFREIPELVSEGTERNLIVDVKNLKVEYLNDERNKGMKKAILNFSLPSGSYGTIVVKKMFN*