ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_rifcsplowo2_02_scaffold_26437_5

Organism: Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_68_150

near complete RP 50 / 55 BSCG 50 / 51 ASCG 12 / 38
Location: comp(3248..4489)

Top 3 Functional Annotations

Value Algorithm Source
glycine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 413.0
  • Bit_score: 816
  • Evalue 1.40e-233
glycine hydroxymethyltransferase (EC:2.1.2.1) similarity KEGG
DB: KEGG
  • Identity: 72.5
  • Coverage: 414.0
  • Bit_score: 606
  • Evalue 7.70e-171
Serine hydroxymethyltransferase n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CNH7_SIDLE similarity UNIREF
DB: UNIREF100
  • Identity: 72.5
  • Coverage: 414.0
  • Bit_score: 606
  • Evalue 2.70e-170

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Betaproteobacteria_68_150 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1242
ATGTTCGCCGCCACCCCGCTTGCCCAGACCGACCCCGAGATCTGGAACGTGATCTGCCAGGAGACGCGCCGCCAGGAAGAGCATATCGAGTTGATCGCATCGGAGAACTACGCCAGCCCGCCGGTGCTCGCGGCGCAGGGGTCGCTGCTGACCAACAAGTACGCGGAAGGCTACCCGGGCAAACGCTACTACGGCGGCTGCGCCTTCGTCGACGTCGCCGAGCAGCTCGCCATCGAGCGCGCGAAAAGGCTGTTCGGCGCCGCTTACGCCAACGTGCAACCGCACTCGGGCTCGCAGGCGAACCAGGCGGTCTATCTCGCGTTCCTCAAGCCGGGCGACACGATGCTCGGCATGTCGCTCGCGCACGGCGGCCATCTCACGCACGGCGCCGCGGTGAACGCGAGCGGCAAGCTCTACCACGCCATTTCCTACGGCCTCGACGCCGACGAGGTGCTCGACTATGCCGAGACCGAGAAGCTCGCGCACGAGCACAACCCGCGCGTCATCATCGCAGGCGCTTCCGCGTATTCGCTCAGGATCGATTGGCAACGGCTGCGGCGCATCGCCGACGACGTCGATGCGCTGCTGATGGCCGATGTCGCGCACTACGCGGGCCTGATCGCAGCGGGCATCTATCCGAGCCCGGTCGGCATCGCCGACGTGGTCACGACGACGACGCACAAGACGCTGCGCGGGCCGCGCGGCGGCATGATTCTCGCCAACGCCGAGCACGAACGCGCGCTCAATGCGGCGATCTTCCCCGGCATCCAGGGCGGTCCGCTGATGCACGCCATCGCCGCCAAGGCGGTGGCGCTCGGCGAAGCGCTGCAGCCCGCGTTCCGCGACTACCAGGCGCAGGTGCTGAAGAACGCGCAGGTCATGGCCGAGACGCTCGCGCGGCGCGGCCTGCGCATCGTCTCGGGGCGCACCGAATGTCACCTGATGCTGGTCGACCTGCGCGCCAAGCACATCACGGGCAAGGCGGCGGAGGAGGCGCTCGGTGCGGCCAACATCACGGTCAACAAGAACGCGATTCCCAACGATCCGCAGAAGCCGGCCGTCACCTCCGGAATCCGCATCGGGTCGCCGGCGATCACCACGCGCGGCTTTCGCGAAGCGGAAGCGGAACGGCTCGGCCACCTCATCGCCGACGTGCTCGACCAGCCGGAGGACCTGGGCGCCGTGGCGCGCGTGTCGAGCGAGGTCAAAGCGCTCTGCACGCGATTTCCGGTCTACGCCTGA
PROTEIN sequence
Length: 414
MFAATPLAQTDPEIWNVICQETRRQEEHIELIASENYASPPVLAAQGSLLTNKYAEGYPGKRYYGGCAFVDVAEQLAIERAKRLFGAAYANVQPHSGSQANQAVYLAFLKPGDTMLGMSLAHGGHLTHGAAVNASGKLYHAISYGLDADEVLDYAETEKLAHEHNPRVIIAGASAYSLRIDWQRLRRIADDVDALLMADVAHYAGLIAAGIYPSPVGIADVVTTTTHKTLRGPRGGMILANAEHERALNAAIFPGIQGGPLMHAIAAKAVALGEALQPAFRDYQAQVLKNAQVMAETLARRGLRIVSGRTECHLMLVDLRAKHITGKAAEEALGAANITVNKNAIPNDPQKPAVTSGIRIGSPAITTRGFREAEAERLGHLIADVLDQPEDLGAVARVSSEVKALCTRFPVYA*